Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01896 ATGGAGAGTATCTTCAACGTTGTTTGCACACATAGCATCAGATGCGGTTCTCAAGCCCTTGGGACATTTTGCAGAATCCCCCCTTGCAAGCAAGTACCCGCCTCTCCATGCAGGAGACAAGATGTAAGAGCAACTGAAATTGATAAAGTGGATATGCACCTATCTTTCCGTCCTGGTGATATTCTGAGAGCTCTTGTGCTTTCTCTTGAAGATGCCTGTGCATACTATCTGTCAACTGCAAAGAACGAACTTGGTGTAGTCTTGGCAGAAAGCACTGTTGTTACAGTCAGACCCCTTCCAATTGGAGCATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAGGCTGAGTCAGGGATTGTAGTAAGAGTCACTTCAAGTGCACAAAGCAAATTTAAGTTCGGGTGGCAAGCAAAAATTGTGGGTCTGATCAGGCTTGACGGTGTCGAGTCCTATCGCTCTGGTGTGTCTGACTGCTGCTGGTGCGACGATGTCCGAGAACGGCAAGGCTGCAAGTCTGGTTATTGTGGCGAAGCAAGTGCTTGCATTATCTTGATACGGGCGACCTCTGTCACCGGATATATCAACCGGAATTATGAGACGGCTATAGGGGAAGTAGGGAAGCTCTTATATGAGGAGGATTGCCCGAAGCAGATCGTGAAAAATACCGAGGCTAGGTGTTTCCAGCTGCAAGAGGAGGCAGATAAGGGACGATTTGAGATTCTTTCCTTGTCTGGTTCATTTATGCCAACCGAGAATGGAGTAACAAGGAGCAGATCTGGTGGAATGAGTGTCTCTTTAGCAGGGCCAGATGGTCGTGTGATAGGGGGTGGACTTGCTGGTCTGTCGGTAGCTGCTGGCCCTGTGCAGGTTGTCGTGGGCAGTTTTCTTCCTGGTCGCCAGCAAGAACAGAAAGCCAAGAAGCAAAAGGATTTTCTGAAGGGTACTCATTGGCCAACTTCGATAACCTTTTGA 1005 0.4786 MESIFNVVCTHSIRCGSQALGTFCRIPPCKQVPASPCRRQDVRATEIDKVDMHLSFRPGDILRALVLSLEDACAYYLSTAKNELGVVLAESTVVTVRPLPIGASVSGKVEKQCAHFFGVTINEQQAESGIVVRVTSSAQSKFKFGWQAKIVGLIRLDGVESYRSGVSDCCWCDDVRERQGCKSGYCGEASACIILIRATSVTGYINRNYETAIGEVGKLLYEEDCPKQIVKNTEARCFQLQEEADKGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVIGGGLAGLSVAAGPVQVVVGSFLPGRQQEQKAKKQKDFLKGTHWPTSITF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01896 334 SUPERFAMILY Nucleic acid-binding proteins 38 92 IPR012340 -
Bach8g01896 334 CDD DUF296 246 306 IPR005175 -
Bach8g01896 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 246 311 - -
Bach8g01896 334 Gene3D - 202 323 - -
Bach8g01896 334 Gene3D - 28 115 IPR012340 -
Bach8g01896 334 ProSiteProfiles PPC domain profile profile. 177 329 IPR005175 -
Bach8g01896 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 242 318 IPR039605 GO:0003680
Bach8g01896 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 233 306 IPR005175 -
Bach8g01896 334 Pfam Exosome component EXOSC1/CSL4 38 69 IPR019495 GO:0000178|GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01896 Bach-Chr8 14361279 14372160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01896 246 323 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 76.250 6.00e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01896 - - pvy:116132978 127.102