Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01879 ATGGATTCTAGCAATGCTCTAACTTTGGATGAGGTCAAACCTGAGAAGAGAATAATTGTAAGGTACAAGGAATGCCTTAAAAACCATGCAGCTGCAATTGGTGGAAATGCCACTGATGGGTGTGGTGAGTTCATGCCTGGAGGAGATGAAGGAACCCTTGAGGCTCTCAAGTGCTCAGCCTGCAATTGTCACAGAAACTTCCACAGAAAAGAGAAAATTGAATCTCATCATCAAGAAAAGTGCTTCCCTCATGTGCTTCCTATTGCTATTCAGGGAAAGCCCATTTTGGGCCATTTATCTCCCAAGAAAAGTGGCTCAAATCCTTACGACCACTCTGATGAGAAGGATTCTGATGTGGGTAAGGAGATGGACAAGGTGGCTGAGAAGGAGAGGAAGAGGTTCAGGACCAAGTTCACTCAAGAACAGAAGGAGAAGATGCTGAGGTTTGCAGAAAAGGCTGGTTGGAGGATTCAGAAGCTAGATGAATCTCTGGTGCAGCAGTTTTGCCAAGAGATTGGTATCAAGAGAAGAGTCCTCAAAGTGTGGATGCACAATAACAAGAAAAGTACTTTTGCCAAGAGAAACTTCATCTCCAGTTCTCCACTGGAAGCTATCTGA 618 0.4434 MDSSNALTLDEVKPEKRIIVRYKECLKNHAAAIGGNATDGCGEFMPGGDEGTLEALKCSACNCHRNFHRKEKIESHHQEKCFPHVLPIAIQGKPILGHLSPKKSGSNPYDHSDEKDSDVGKEMDKVAEKERKRFRTKFTQEQKEKMLRFAEKAGWRIQKLDESLVQQFCQEIGIKRRVLKVWMHNNKKSTFAKRNFISSSPLEAI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01879 205 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 188 - -
Bach8g01879 205 NCBIfam homeobox domain, ZF-HD class 131 188 IPR006455 -
Bach8g01879 205 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 21 71 IPR006456 -
Bach8g01879 205 SUPERFAMILY Homeodomain-like 126 187 IPR009057 -
Bach8g01879 205 FunFam Zinc-finger homeodomain protein 2 118 192 - -
Bach8g01879 205 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
Bach8g01879 205 Gene3D - 116 192 - -
Bach8g01879 205 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
Bach8g01879 205 MobiDBLite consensus disorder prediction 107 124 - -
Bach8g01879 205 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01879 Bach-Chr8 14133390 14134007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01879 7 200 ZF-HD Transcription Factor Family AT2G02540 45.701 3.49e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach8g01879 ZF-HD_dimer 3.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01879 - - gmx:100793926 263.848