Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01848 ATGGATCAGAAAGCATCCGAGGAAAGTGGGCTAAAGGCTCTGAAATTTGAGTGTACAAAGATCCTTCATGGAGTTGATAAAGAAATTGCATGTCAGACACCAGAGAAACCCACTGAACCTTTATCCACTAAATCCAAAGAGGGACAAATCCAGCTTCCTGAGAAATACAGGAACATAGCGGATTTGTTTGATCATATGGGTTGTTCACTGAGGTTACTTAATCTGCTTAAAATGTCTCCAACTTTTCAAAACATTTGCGCTCAGGTTGAAGTTATGGCCAAAAGAAAGTTCTTGTACCCACATCTTGCTCAGATGAAGTATGTACTTCCTGAAGCCATTCATATGGAAAAGATACTAGTACATGACAAGAAAAGCTTGTATATGAAGCCAGATTTGAAGATTACCTTGACACTTGAGGTTGTGGAAGGGAACCCTAGTGAATCTGCTTACTTATCTCTTTGCAAACTTTTTGGTTCCAGGCTGATAGATTTCTTCTCAAAACATCCTGAGTACTACAACTTCTTTGCTTGTGCCTTAGCTATACTTGTTGCCAGGTCTAAGTTTGTCAATGTCATAGCAGATAGTTGTAATCACATACCTCTTAGAGTTGGCCGGATAAACTTGAATGTGTTTGAAAGTAATCGGTCCTTTTTGTTTTTTGTGGGCAAGGCTACTGATGTTCCTGAGGCCACACTACCAGAGCCTTTTAGCCAAAAGACTCCTAGCTTGATTTGTGAAGATTTGCCAGTAGATTCATCAACAATAATTTCACAAACTTCAGATGAAATTCAAACTTTGTCAGAGAAATTCCGTCCATACCCCTCTTTCGGTAGACATTTCTCTCAGAAAAATGTTGCCGCCGGGGCAGAAAAGGTCCAGTGTTTGTCATCTTCTGCATCTGATCGCGCAAGTAATGAAGAAAGTGAAAGCAGATGGCAAAAAGGATGTTCTTCTTTGTGTTTGAAATCTGATGCCACGATTAATCAGGACATAGAACGAGGAGAGCAGGAGGAATCATGTTCTATGTGTTTTCAACCAAGTGTTATTGACACACCAGCTCATCAGATCTGCCTTCCTCACTCTTTCAGTAGTGGTAGTTCTGAAGGCCCTGATGTCAAGGTTGCCTCACCCGCTGATAGTTTAATAGCAGAGACACCTGTGCAGTTAACACCTAGGAGATTAATATCCAGCTCTGATGTTAAAGTTCAAACTGTGTCTACCCAAAATTCAACTTCATGTTATAAACCTGCAAAAAGAGGTCTTGACTTTTCACGCATGCAAGGTGATAATGATGCATTGGACCTTAGTGAAAACAAGTTAGAATCTAGTAGAGTGGTGCATGATAACATCCCTGATGCAAGTCAAGGAGCTTCTGAGGGGTGTGAAGCTTCTGGTTCTGTAGTTCTACCCCAGGAGGTAGAAGATCCCCTTGTTTGTTCTCATGAGAAGGCCAACCAAATACAAGCCGGTTTAGCAACAAAACAGCATATTTCCTCATCATTGATTGACCTAGTTGGTGTGATAGACTCTGTATTTTGTTCTGTCAAATACTCTCCAATCACAAAAGCAGAGTTACTGCACAAGATAATTATGGATAGTCTAGACTATGTTGAGATCAGAGAAGTTGAAGAAAGGGTTGAGATTCTTGAAAAGGTTGCGCCAGATTGGATCAGCAAGAAGTTGGTGCCTACTGGAGATGCCATGCCCGGCGGGCTTAAGCCTGTACGTCTTGACTCGGCGTTTACTCATACGTGGCTCCGTCTAGTTCAGTCTCTGCATAACTTCTTTGACGCCGGCAAATCCTTCCGGCGCCAGTATCGAGACTGGTTGTTCCATATCGGAAACCAGAAAGAAATGACAAGTAAGGATTTAGGCATCAGTAAAAATTATGAATATAAAGAATTTAATAGTTCCAAGCGCTCAAATACTTCTAAAGTGTGGGAAGATATGCAAAGAATTCAAACAAGTGAAGGCAGTAAAGTTCAATGCAATCACTGTGGCAAGCTTTTGCAAGATAATTGTGGGACTTCTCATTTGAAGCGTCACTTAATCATATGCCCTAAGAATCCAAAACCATTGAATACTGTTGCTCCAGATTCAATGGCTTCAACGTGCATTAGAGACACTGGTAATGACAAAGAATCTGGATCAAATGCAATGTTTGTGGTTCAACCTATAAAGGCTGAACCTCAGTCCGAATTCATGAGTTCTGCAACACCAAGTATTCTGCGGTCAACAATTGCTGCTTCCACCAACAAAGTTACTGGAGGAGGACTACAAAAAACCAGTCCCACTATGTTGCTGTCTAACATTGAATTATCTAGAAATCAAATGGAACTAACTCTGGATGACGTAGAAATGAAAGCATTTTATGCTTCTCTGGATGCTGAGACCTCTGTTCTGTCACCTTCTCAAGATACCAGAATCATTACTGAGGTGGCCAACATCATGCCCGGTGAAGAGACCCAGAAAGCATTGAAAAGACTAAAAGACTTTCTCTCCAAAGACTTCTCTGCTTTGTTGCATCCTGGGCAGTGCAGCACCATGAAAACTACTTTAGAGTACCTGTCCAATTTGTCAGAAGATGATGGAATCACTGTGGATATGAAGCTGTTGATATTAGAAATTTCACGAGAATTCACTCAGTGGAGTTTGGACTACAATGATGCAAGTAGAAAAATTGAGTCTGCCAGCACCAACCTGTTGAAAGCAGATAAACAAGAAGAGGGCCTTGAGGCTAACAAGAACCAATTCAAGGAAGTTGTATCCTTGGAAGATGAGTTAATCAACCAGTTGGCCTATTTGGAGGAAAGAAAGAAAGAAGAGCAAATCACTGCTATCAAGACAAACTTATTTGTTTTCCAATCAGCCAAGAACACTGCTACCAAGAGAAAGAGAGAAATCTTCGAGGAAGGGAAGACGCTCAAAGCTCAAAGAGATGAATTGAAGAAACAAGCCACGAGCCTGAGAGACGAGTGGGAATCAGCAAAGAAAATTCAAGCAGATACAAGAGCTGAGTGGTCAAAACTTGGAGAGAAATTTAACAAAAGCCTAAGTGGTGTAAACTTTGATTTGGATAATGGAAGCCGCATTCAGTCTTGTTAG 3105 0.4106 MDQKASEESGLKALKFECTKILHGVDKEIACQTPEKPTEPLSTKSKEGQIQLPEKYRNIADLFDHMGCSLRLLNLLKMSPTFQNICAQVEVMAKRKFLYPHLAQMKYVLPEAIHMEKILVHDKKSLYMKPDLKITLTLEVVEGNPSESAYLSLCKLFGSRLIDFFSKHPEYYNFFACALAILVARSKFVNVIADSCNHIPLRVGRINLNVFESNRSFLFFVGKATDVPEATLPEPFSQKTPSLICEDLPVDSSTIISQTSDEIQTLSEKFRPYPSFGRHFSQKNVAAGAEKVQCLSSSASDRASNEESESRWQKGCSSLCLKSDATINQDIERGEQEESCSMCFQPSVIDTPAHQICLPHSFSSGSSEGPDVKVASPADSLIAETPVQLTPRRLISSSDVKVQTVSTQNSTSCYKPAKRGLDFSRMQGDNDALDLSENKLESSRVVHDNIPDASQGASEGCEASGSVVLPQEVEDPLVCSHEKANQIQAGLATKQHISSSLIDLVGVIDSVFCSVKYSPITKAELLHKIIMDSLDYVEIREVEERVEILEKVAPDWISKKLVPTGDAMPGGLKPVRLDSAFTHTWLRLVQSLHNFFDAGKSFRRQYRDWLFHIGNQKEMTSKDLGISKNYEYKEFNSSKRSNTSKVWEDMQRIQTSEGSKVQCNHCGKLLQDNCGTSHLKRHLIICPKNPKPLNTVAPDSMASTCIRDTGNDKESGSNAMFVVQPIKAEPQSEFMSSATPSILRSTIAASTNKVTGGGLQKTSPTMLLSNIELSRNQMELTLDDVEMKAFYASLDAETSVLSPSQDTRIITEVANIMPGEETQKALKRLKDFLSKDFSALLHPGQCSTMKTTLEYLSNLSEDDGITVDMKLLILEISREFTQWSLDYNDASRKIESASTNLLKADKQEEGLEANKNQFKEVVSLEDELINQLAYLEERKKEEQITAIKTNLFVFQSAKNTATKRKREIFEEGKTLKAQRDELKKQATSLRDEWESAKKIQADTRAEWSKLGEKFNKSLSGVNFDLDNGSRIQSC 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01848 1034 CDD Cdt1_m 34 235 IPR014939 -
Bach8g01848 1034 Coils Coil 965 992 - -
Bach8g01848 1034 SMART bed5 641 689 - -
Bach8g01848 1034 Gene3D - 491 569 IPR038090 -
Bach8g01848 1034 SMART CDT1_2 52 170 IPR014939 -
Bach8g01848 1034 Pfam DNA replication factor Cdt1 C-terminal domain 485 559 IPR032054 -
Bach8g01848 1034 SUPERFAMILY beta-beta-alpha zinc fingers 644 688 IPR036236 -
Bach8g01848 1034 Coils Coil 887 914 - -
Bach8g01848 1034 Coils Coil 768 788 - -
Bach8g01848 1034 Pfam BED zinc finger 644 683 IPR003656 GO:0003677
Bach8g01848 1034 Pfam DNA replication factor CDT1 like 52 119 IPR014939 -
Bach8g01848 1034 PANTHER DNA REPLICATION FACTOR CDT1 36 568 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bach8g01848 1034 SUPERFAMILY "Winged helix" DNA-binding domain 48 235 IPR036390 -
Bach8g01848 1034 ProSiteProfiles Zinc finger BED-type profile. 641 693 IPR003656 GO:0003677
Bach8g01848 1034 Coils Coil 925 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01848 Bach-Chr8 13712173 13720518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01848 501 568 Core DNA Replication Machinery Family AT2G31270 38.235 4.94e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01848 K10727 - gmx:100527367 499.975