Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01838 TGGCTGTGTTGATTCAATCAAACTGTAGGGCCTTACTGAATCACTGTTCGGCGAACATGAATGAGAAAGCCTCCGTCTCTAAAGAGCTCAATGCGAAGCACCTCAAGATTTTAGAGAATTTAGCTAAGCTGCCTGAAAACAGAGAGTGTGCAGATTGCCGAAACAAGGCGCCACGATGGGCAAGTGTGAATTTAGGGATTTTCATATGCATGCAATGTTCAGGAATTCACCGCAGCCTTGGAGTGCATATATCAAAAGTGCGTTCCACTACTTTGGATACATGGTTGCCAGACCAAGTTTCTTTCATGCAATATATGGGTAATGGGAAGTCAAATAAGTATTGGGAGGCAAAATTGCCACCAAATTTTGACAGAACTGAATACTGGATTGAGAAGTTTATCCGTGCCAAATATGTGGAGAAAAGATGGGCAGCAGAAGGTGGATTACTAGCAACTACGAAGTCAGGTGAATTTGTCCGTAACTTAGATGACTTACCTGTTGGTGGGGCCAGGAGTGGTTTCCCAAAAAAAAATAGAAGGCTCTCTCTTGAGGAAAGTATTCTTACTAACTACATTGCACAAATTCTGCCTCCAGCACCAAGATCTCGTCAGGGTTCTTTTGATCTGCAAAACAAGAGTACTGCACCTCCATTAAAGGGGCCACCACCTGCAGATTTTGGTCAGTCCCCAGCCAAGAACAATGGTATCACTGATCTTTTCGGCTTGGCTTTCATCCATGAAGATAAAAAGGATTCTTCAACTGTGCCTCCTGCAAGCTGGACAACATTTAATTGTAAGACATCAATACTTGTAGCATAG 818 0.4303 MNEKASVSKELNAKHLKILENLAKLPENRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQYMGNGKSNKYWEAKLPPNFDRTEYWIEKFIRAKYVEKRWAAEGGLLATTKSGEFVRNLDDLPVGGARSGFPKKNRRLSLEESILTNYIAQILPPAPRSRQGSFDLQNKSTAPPLKGPPPADFGQSPAKNNGITDLFGLAFIHEDKKDSSTVPPASWTTFNCKTSILVA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01838 253 Pfam Putative GTPase activating protein for Arf 18 127 IPR001164 GO:0005096
Bach8g01838 253 MobiDBLite consensus disorder prediction 180 212 - -
Bach8g01838 253 Gene3D Arf GTPase activating protein 1 128 IPR038508 -
Bach8g01838 253 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 245 IPR044520 GO:0005096
Bach8g01838 253 SUPERFAMILY ArfGap/RecO-like zinc finger 17 126 IPR037278 -
Bach8g01838 253 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Bach8g01838 253 FunFam stromal membrane-associated protein 1 isoform X1 1 129 - -
Bach8g01838 253 CDD ArfGap 19 119 - -
Bach8g01838 253 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Bach8g01838 253 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Bach8g01838 253 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Bach8g01838 253 ProSiteProfiles ARF GTPase-activating proteins domain profile. 13 124 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01838 Bach-Chr8 13581582 13584494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01838 19 119 C2H2 Transcription Factor Family AT4G05330 47.664 3.30e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01838 K12486 - gmx:100803735 347.436