Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01827 ATGGTGAGAAAGAGAAGGACTGAAATACCCGGAGGTGGAGAAAGCTCTGAGACTCAAGAGGTTGGGGGTAGTGGTCGGGGTCCTCAGCGCCCTGCTGAAAGGAGTTCTCCACCCCAACAACAGCCGGCAGGGGGTGGACCTCAAGGTGGTAGAGGTTGGGGTCCTCAAGGAGGACGAGGGAGTTATGGTGGGGGTCGCAGTGGTGGGATACCCCAGCAGCAGTATGGTGCCCCTTCTCAGTATCAAGTTAGGGGGAGAGGAGGGCCTTCACATCAGGGAGGCCGTGGAGGATATGGTGGTGGCCGTGGTGGTGGGGGTGTGGGCAGTGGCCGTGGTTTAGGACCTTCTTTTGGTGGTCCATCTCGGCCACCAGTTCCCGAACTGCACCAAGCTGCCTCAGTTCCATATCATCAAGCTGGAATAACTCCTCAGCCCACATCATCTGAGGCTAGTTCTTCTTTACAACCAATTGAGCCATCAAAAGTGGAACAACAATTCACGCAGATGACAATTCAGTCAGAACCTGCAGCTCCTCTTCCCACATCTAGTAAATCAGTGAGGTTTCCACTCCGGCCTGGAAAGGGTAGTTATGGTACTAGATGCACAGTTAAGGCTAATCACTTTTTTGCTGAGTTACCCAGCAAGGATCTGCACCAGTATGATGTTACCATCACACCTGAGGTGACCTCCCGAGGTGTGAACCGTGCTGTGATGGAGCAGCTTGTTAGGCTATACAGGGAGTCACATTTAGGTAAGAGACTTCCGGCCTATGATGGTCGAAAGAGCTTATACACTGCTGGGCCACTTCCTTTTATGTCAAAGGAGTTTAGGATCACTCTTATGGACGAAGATGATGGATCAGGAGGGCAAAGGAGAGAAAGAGAATTCAGAGTTGTGATAAAATTGGCTGCACGTGCGGACCTGCATCATTTGGGAGAGTTTTTGATGGGGAGGCAACCTGATGCACCTCAGGAAGCTCTGCAGGTTCTTGACATTGTTCTGCGTGAGCTGCCTACTACTAGATATTGTCCTGTTGGAAGATCTTTTTATTCGCCTTATCTTGGTCGAAGACAGCCCTTAGGTGAGGGATTGGAAAGTTGGCGTGGTTTCTATCAAAGTATCCGTCCGACCCAGATGGGTTTATCTCTAAACATTGATATGTCGTCCACTGCATTCATTGAGCCATTGCCAGTAATTGACTTTGTAACTCAGCTGCTGAACAGAGATGTTTCCTCTAGACCATTGTCTGATGCTGATCGTGTGAAGATCAAAAAAGCTCTTCGTGGTGTCAAAGTTGAAGTTACACACCGTGGAAACATGCGCAGAAAATATCGTATATCTGGTTTAACATCACAAGCAACAAGAGAACTGACATTCCCTGTTGATGAGCGTGGTACAATGAAGTCTGTTGTGGAGTATTTCTACGAGACGTATGGATTTGTCATTCAACATACTCAGTGGCCATGTTTACTAGTGGGCAATCAGCAGAGACCAAACTATTTACCTATGGAGGTTTGCAAGATAGTAGAAGGTCAAAGGTACTCTAAGAGGTTGAATGAGAAGCAGATTACTGCTTTGCTGAAAGTGACTTGCCAGCATCCTGTGGAAAGGGAGAAAGATATTTTACAGACTGTTCATCACAATGCTTACCATGAGGATCCTTATGCAAAAGAATTTGGGATCAAAATCAGTGAGAAGCTCGCTCATGTTGAAGCTCGCATTCTTCCTGCTCCCCGGCTTAAGTATCATGATACTGGTAGAGAAAAGGATTGCCTACCACAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTGAATGGTGGTACTGTTAATTATTGGATTTGCATAAATTTTTCAAGGAATATTCAAGATAGTGTGGCCCGTCGATTTTGCTCTGAGCTTGCCCAAATGTGTAACATATCTGGCATGGCATTTAATCCGGAGCCAGTACTTCCCCCTCTTAGTGCCCGCCCTGACCAGGTGGAGAAGGTTCTGAAAAGTCGGTATCATGATGCCATGACTAAACTACCTGGAAAGGAGCTTGATCTCCTTATTGTTATTCTGCCTGATAATAATGGCTCTCTTTATGGTGATTTGAAACGTATATGTGAGACTGATCTTGGGATTGTCTCCCAGTGCTGCTTGACTAAGCATGTCTTCAAAATGAATAAGCAGTATCTTGCTAATGTGGCTTTGAAAATTAATGTGAAGGTTGGTGGAAGGAATACAGTGCTTGTTGATGCAATTTCCCGGCGCATACCATTAGTCAGTGATCGTCCTACTATTATATTTGGAGCCGATGTTACTCATCCACATCCTGGAGAGGATTCAAGTCCCTCTATAGCAGCTGTTGTGGCTTCGCAAGATTGGCCTGAAATTACAAAGTATGCTGGTTTGGTTTGTGCTCAAGCACATCGACAGGAGCTCATTCAAGACCTTTTCATGCAGTGGCAAGATCCTGTGAGAGGAACAGTAACTGGTGGAATGATCAAGGAACTTCTCATATCCTTCCGGAGGGCGACAGGGCAGAAGCCACAACGTATCATATTTTACAGGGATGGTGTAAGTGAGGGACAGTTCTATCAGGTTTTGCTGTTTGAGCTTGATGCTATTCGGAAGGCATGTGCATCCCTTGAGCCAAACTATCAACCTCCTGTCACATTTGTGGTGGTTCAAAAGCGTCATCACACCAGGCTTTTTGCCAGCAACCATCATGACCGGAGTTCTGTTGATCGGAGTGGAAATATATTGCCTGGCACTGTGGTAGACTCCAAAATCTGCCATCCTACTGAGTTTGATTTTTATCTTTGTAGCCATGCTGGAATACAGGGTACAAGCCGTCCAGCACACTACCATGTCTTATGGGATGAGAACAATTTTACAGCAGATTCTCTCCAAACCCTCACCAATAACCTCTGCTATATTTATGCAAGATGCACTCGTTCTGTTTCAATTGTGCCCCCTGCATATTATGCTCATTTGGCTGCTTTCCGAGCCCGATTTTACATGGAACCTGATACATCAGATAGTGGGTCAATGGCAAGTAGTGCTGCTGCTGGACGTGGGGGTATGGGTGGTGGTGCTGGACGGAGCACTCGTGCACCTGGTGCAAATGCTGCCGTTAGGCCCCTTCCTGCTCTTAAGGAGAATGTCAAAAGGGTTATGTTCTACTGTTAAATTCAGTTCCTGATCTTTCAAATTAGGCAATAATTTATGACTTCTGTAACCTGCGAACAAAATTCAGCAGCAGTAGTACTCTGATTAAACTATTGCTATGGAAGGTTGCTTTTGGAGATTTGTTTATCTGAGATGTTTTGGTGTAATTTTGCAGGACTTGTTATTTAGTGAGTTAAATATGAATCACGGGTTATTTCTT 3379 0.4572 MVRKRRTEIPGGGESSETQEVGGSGRGPQRPAERSSPPQQQPAGGGPQGGRGWGPQGGRGSYGGGRSGGIPQQQYGAPSQYQVRGRGGPSHQGGRGGYGGGRGGGGVGSGRGLGPSFGGPSRPPVPELHQAASVPYHQAGITPQPTSSEASSSLQPIEPSKVEQQFTQMTIQSEPAAPLPTSSKSVRFPLRPGKGSYGTRCTVKANHFFAELPSKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFMSKEFRITLMDEDDGSGGQRREREFRVVIKLAARADLHHLGEFLMGRQPDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPYLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLLVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQHPVEREKDILQTVHHNAYHEDPYAKEFGIKISEKLAHVEARILPAPRLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNYWICINFSRNIQDSVARRFCSELAQMCNISGMAFNPEPVLPPLSARPDQVEKVLKSRYHDAMTKLPGKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFMQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADSLQTLTNNLCYIYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASSAAAGRGGMGGGAGRSTRAPGANAAVRPLPALKENVKRVMFYC 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01827 1059 Gene3D paz domain 389 514 - -
Bach8g01827 1059 SMART PAZ_2_a_3 400 532 IPR003100 GO:0005515
Bach8g01827 1059 FunFam Protein argonaute-2 389 515 - -
Bach8g01827 1059 FunFam Argonaute 10 574 747 - -
Bach8g01827 1059 CDD PAZ_argonaute_like 395 509 - -
Bach8g01827 1059 Gene3D - 753 1059 IPR036397 GO:0003676
Bach8g01827 1059 MobiDBLite consensus disorder prediction 137 164 - -
Bach8g01827 1059 Pfam N-terminal domain of argonaute 200 334 IPR032474 -
Bach8g01827 1059 Pfam PAZ domain 400 526 IPR003100 GO:0005515
Bach8g01827 1059 Pfam Mid domain of argonaute 593 668 IPR032473 -
Bach8g01827 1059 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 175 1006 - -
Bach8g01827 1059 FunFam protein argonaute 10-like 753 1059 - -
Bach8g01827 1059 ProSiteProfiles PAZ domain profile. 396 510 IPR003100 GO:0005515
Bach8g01827 1059 SMART DUF1785_2 343 395 IPR014811 -
Bach8g01827 1059 SUPERFAMILY Ribonuclease H-like 670 1006 IPR012337 -
Bach8g01827 1059 Gene3D - 574 747 - -
Bach8g01827 1059 CDD Piwi_ago-like 554 1004 IPR045246 -
Bach8g01827 1059 Pfam Argonaute linker 1 domain 344 394 IPR014811 -
Bach8g01827 1059 MobiDBLite consensus disorder prediction 1013 1037 - -
Bach8g01827 1059 ProSiteProfiles Piwi domain profile. 684 1005 IPR003165 GO:0003676
Bach8g01827 1059 MobiDBLite consensus disorder prediction 1 164 - -
Bach8g01827 1059 Pfam Glycine-rich region of argonaut 76 177 IPR024357 -
Bach8g01827 1059 Pfam Piwi domain 685 1004 IPR003165 GO:0003676
Bach8g01827 1059 SUPERFAMILY PAZ domain 203 547 IPR036085 GO:0005515
Bach8g01827 1059 SMART Piwi_a_2 684 1005 IPR003165 GO:0003676
Bach8g01827 1059 Pfam Argonaute linker 2 domain 536 582 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01827 Bach-Chr8 13448248 13454497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01827 80 1059 Eukaryotic Initiation Factors Gene Family AT1G48410 81.662 0.0 1617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01827 K11593 - gmx:100780375 1776.91