Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01798 ATGGTATTAGGGTGGGGAAGAAGGAAGAAAAGCCACCGGGCTGGGCGCAAGCCTGAAATGGAGCTGGTAATTCCAAACCATTTCAGGTGCCCGGTTTCTCTTGATTTAATGAAAGATCCTGTGACATTGTCTACTGGGATCACCTATGATAGAGAAAGCATTGAAAGGTGGTTTGAAGATGGGAATTACACTTGCCCAGTTACCAATCAGATTCTGAGAAACTTTGATATGATTCCCAATCATACACTTAGAATAATGATTCAGGATTGGTGTGTAGATAATAAGCAATATGGGGTTGAGAGAATCCCAACTCCAAGAATACCCATTACCCCAATTGAAGTCTCTGAGGTTCTTCTGCTAGTGAAGGCCTCTGCTAGACGTTTAGATCCATATGAGAGCTTAGAATTAGTGCAGAAAATTGAGAAGTGGGGTGAGGAGAGTGAAAGAAACAGGAGATGTATATTAGAGAATGGAGCTCCTGGTGCATTGGCGTCTGCATTTGATGCCTTTGCAAATGATTCTGTTGAAAAGCATGTGAGTGTTTTAGAAGAGATTTTATCTGCCCTCAATTGGACGTTTCCTCTGCTACCAGAAGCCCAGAAATGCTTGGGATCCAAAGCTTCTTTACGTTGCATGGTGTGGTTTTTGAAGAACCAAGATCTTTCAGGGAAGCACAAGGCCATTGTTGCTCTCAAGGAGCTTCTTTCTTTTGGTGATCACCAGCATTTGGAGACGCTGGCAGGAATTGAAGGAGTCAATGAGTTATTAATGGGATTTATCAGCAAAAGAATTTCCCCAACAATTACAAAAGCTTCATTGGCTGTGGTCTTGTCCATGGTTTCATCCTCTTATCCATCAAGTGAGAAGATGAAACTGGCATTCATTGAATCTGGGTTGGTTTCTTTGGTGTTGGAGATTCTCATAGACTCAGAAAGGAGCCTATCTGAGAAAGCTCTGGGAATTTTTGACTCACTCTGCAGTTGTGAACAAGGAAGAGAACAAGCTTATGGCAATGCTCTGACAATCCCTGTGCTGGTGAAGAAGATTCTGCGAGTCTCAGCATTGGCCACAGAGTACTCTGTTTCTGCTATTTGGAATCTCTGCAAGAATGGAGAGAAAGAGGAAGAAATTGTTCCGGTTGAGGCCCTTCAAGTTGGTGCCTTTCAGAAGCTCTTGTTAGTATTGCAGGTTGGTTGTGGTGATGAAACCAAAGAGAAAGCAACAGAGCTTCTGAAATTGTTGAATCCTCATAGGGCTGGTTTGGAATGCATAGAGACAGCAGATTTCAAGAATCTGAAGAGATCATTCTGA 1311 0.4272 MVLGWGRRKKSHRAGRKPEMELVIPNHFRCPVSLDLMKDPVTLSTGITYDRESIERWFEDGNYTCPVTNQILRNFDMIPNHTLRIMIQDWCVDNKQYGVERIPTPRIPITPIEVSEVLLLVKASARRLDPYESLELVQKIEKWGEESERNRRCILENGAPGALASAFDAFANDSVEKHVSVLEEILSALNWTFPLLPEAQKCLGSKASLRCMVWFLKNQDLSGKHKAIVALKELLSFGDHQHLETLAGIEGVNELLMGFISKRISPTITKASLAVVLSMVSSSYPSSEKMKLAFIESGLVSLVLEILIDSERSLSEKALGIFDSLCSCEQGREQAYGNALTIPVLVKKILRVSALATEYSVSAIWNLCKNGEKEEEIVPVEALQVGAFQKLLLVLQVGCGDETKEKATELLKLLNPHRAGLECIETADFKNLKRSF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01798 436 ProSiteProfiles U-box domain profile. 23 97 IPR003613 GO:0004842|GO:0016567
Bach8g01798 436 FunFam RING-type E3 ubiquitin transferase 24 95 - -
Bach8g01798 436 SUPERFAMILY RING/U-box 19 100 - -
Bach8g01798 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 101 IPR013083 -
Bach8g01798 436 PANTHER WDSAM1 PROTEIN 21 424 IPR045185 GO:0061630
Bach8g01798 436 SMART Ubox_2 27 90 IPR003613 GO:0004842|GO:0016567
Bach8g01798 436 SUPERFAMILY ARM repeat 143 414 IPR016024 -
Bach8g01798 436 CDD RING-Ubox_PUB 25 77 IPR045210 -
Bach8g01798 436 Gene3D - 120 414 IPR011989 -
Bach8g01798 436 Pfam U-box domain 24 95 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01798 Bach-Chr8 13090645 13091955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01798 17 436 U-box Gene Family AT5G37490 46.588 1.49e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01798 - - qsa:O6P43_008457 625.165