Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01788 ATGCAGCTTCTAAAACTCCCCGTTTTGCTTCCCCTCTTGCTCATTCTGCTTCCTCTAGTGAAACCGGATCAGGGTTCTGAGCGAGCCGCTCTCTTGGCTCTCCGTTCGGCGGTGGGTGGCCGAACCCGGCTCTGGAATGTTACAGAGCAGAGTCACTGCAAGTGGGCTGGTGTCCAATGCGAGCAGGACCACATCGTTGAGCTTCATCTTCCAGGTGTAGCGCTTTCAGGCCAATTACCCACTGGCATTTTTGGCAACTTGACTCATCTGCACACTCTTAGCCTTCGGGTTAATGCCTTAACTGGTGGGTTGCCTTCAGATCTCGCTTCCTGCGTCAATCTTCGCAATCTTTACTTGCAGCAAAATTTATTTTCTGGGGAAATCCCGGACCTTTTGTTTACTCTACCCGATTTGGTTCGGCTTAATTTGGCGTCCAACAATTTTTCCGGTGAGATTCCACCGGATTTCAACAAATTGGTAAGGTTGAAGACTCTTTTTCTGGAAAATAACAAACTTTCCGGTTCCATCCCTAAATTGGACGTGTTAAAGCTTGAGCAATTCAATGTTTCGAACAATTTGCTGAATGGGTCAGTGCCAGAGAAGTTACAGACTTTTTCTCAAGACTCATTCCTTGGCAATTCGCTATGTGGGAAGCCCCTTAATCTTTGTCCAGGAGATAATGGAACTCCTGCATCGGGAGGGATTGAAACCAATGAGGGAAACAAGAAGAAGAAATTGTCTGGTGGTGCCATTGCCGGGATAGTTGTTGGATCTGCGGTGTGTCTTTTGTTCATTCTATTTGTTTTGATTTTTCTGTGCAGAAAGAAGAGCGGCAAGAAGAAAAGCTCAGTTGACATTGCAACTATGAAGCAACCAGAAGTGGAAATTCCGGGTGAGAAACCTGTCTCTGATGTGGAGAATAGTGGTCAAAGTAATGGGTATTCAGTAGCCGCGGCGGCAGCAGCAGCATTGACAGGGAATGGCAAAGCAGAAGCTAACAGTACTGGAGCTAAGAAGTTGGTGTTCTTTGGCAATTCACGTAGGGTTTTTGATCTCGAGGATTTGCTTAGAGCTTCGGCTGAGGTTTTAGGTAAAGGGACTTTTGGCACAGCCTACAAGGCTGTTTTGGAGGTTGGCCCTGTGTTGGCTGTGAAAAGATTGAAGGATGTGACAATTACTGAGAAGGAATTCCAGGAGAAAATTGAATCCGTCGGAGCAATGGATCATGAGAATCTGGTCGCTCTGAGGGCTTACTATTTTAGCAGGGATGAAAAGCTTCTTGTCCATGATTACATGCCCATGGGAAGCTTATCTGCACTTTTGCATGGAAATAAAGGGGCTGGCAGAACGCCACTGAATTGGGAAATTAGATCAGGCATTGCACTTGGAGCTGCTCGTGGCATTGAGTACTTACATTCACAAGGCCCTAATGTTTCTCATGGAAATATAAAATCATCTAACATCCTCCTAACCAAATCCTATGAAGCCAGAGTTTCTGATTTTGGCCTTGCACACCTCGTTGGTCCCTCCTCAACTCCCAACCGGGTTGCTGGGTACCGTGCACCCGAGGTAACTGATCCTCGCAAAGTATCCCAAAAGGCAGATGTGTACAGCTTCGGAGTGTTGCTCCTGGAACTCCTCACTGGAAAAGCTCCTACTCATGCTCTCTTAAATGAAGAAGGAGTAGACCTTCCCAGATGGGTACAATCTGTTGTAAGAGAAGAGTGGACATCTGAAGTTTTTGACCTTGAGCTCCTCAGGTACCAGAATGTTGAGGAGGAAATGGTTCAGCTGTTGCAACTTGCAGTAGATTGTGCAGCTCCATATCCTGATAAGCGCCCTTCAATGCCTGAAGTCACAAGGCGCATTCAAGAGATATGTCGTTCTAGCGTCAAAGGTGATCAGCAGCCTGCTACGATCAATGATACAGATGATGTTTCTTCATGA 1947 0.4643 MQLLKLPVLLPLLLILLPLVKPDQGSERAALLALRSAVGGRTRLWNVTEQSHCKWAGVQCEQDHIVELHLPGVALSGQLPTGIFGNLTHLHTLSLRVNALTGGLPSDLASCVNLRNLYLQQNLFSGEIPDLLFTLPDLVRLNLASNNFSGEIPPDFNKLVRLKTLFLENNKLSGSIPKLDVLKLEQFNVSNNLLNGSVPEKLQTFSQDSFLGNSLCGKPLNLCPGDNGTPASGGIETNEGNKKKKLSGGAIAGIVVGSAVCLLFILFVLIFLCRKKSGKKKSSVDIATMKQPEVEIPGEKPVSDVENSGQSNGYSVAAAAAAALTGNGKAEANSTGAKKLVFFGNSRRVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGPVLAVKRLKDVTITEKEFQEKIESVGAMDHENLVALRAYYFSRDEKLLVHDYMPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMPEVTRRIQEICRSSVKGDQQPATINDTDDVSS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01788 648 ProSiteProfiles Protein kinase domain profile. 357 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g01788 648 FunFam Probable inactive receptor kinase At1g48480 432 635 - -
Bach8g01788 648 CDD STKc_IRAK 363 626 - -
Bach8g01788 648 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Bach8g01788 648 SUPERFAMILY Protein kinase-like (PK-like) 361 622 IPR011009 -
Bach8g01788 648 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Bach8g01788 648 Gene3D Transferase(Phosphotransferase) domain 1 432 645 - -
Bach8g01788 648 SUPERFAMILY L domain-like 37 204 - -
Bach8g01788 648 Pfam Protein kinase domain 360 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g01788 648 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Bach8g01788 648 FunFam pollen receptor-like kinase 1 326 431 - -
Bach8g01788 648 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Bach8g01788 648 PANTHER OS05G0588300 PROTEIN 11 630 - -
Bach8g01788 648 Gene3D Ribonuclease Inhibitor 138 223 IPR032675 -
Bach8g01788 648 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Bach8g01788 648 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01788 Bach-Chr8 12989062 12991651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01788 23 626 Receptor kinase-like Gene Family AT1G48480 66.126 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach8g01788 Pkinase 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01788 - - qsa:O6P43_008468 971.844