Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01763 ATGGACCCAACCTCGATCCCTCCGGTCACCCACACCGCCCCCTCGCCTCCCTTCCCCGCCGTGGCACCTCCTTCCACTGCCGTTCCTTTCCCCCCTGTATCCCTCCCCGTTCCTTTTCCCGTTCCCGCCTCTGCCCCTGTCCCCATCCCTGCCCCTGCCCCTGCCGAAACTAATAATCACGTTGCCCCTACCGCCAACGCCGACCCGAGTGCTACTGCTGCTCCTGTTCCGAACCACCCTCCCTATGCTGATATGATATTTTCAGCAATCGGGGCTCTGAAGGAGAAAAATGGTTCCAGCAAGAGAGCTATCGCCAAGTACATAGAGCAAGTGTACCGAGACCTTCCCCCTACTCACTCGTCCTTGTTGACTCACAATCTGAAGCGTTTGAAAGCCAGTGGTCAACTTGTAATGGTTAAAAAATCTTACAAGCTACCTAGATCTGATGCTTCAGCTTCTACTCCCCAAAGGGGTCGTGGCCGTCCCCCCAAGCTCAAGCCGCAGCTTCAACCCCAACCCCAGCCGCAGCTCCTAGCCCAGTCACAGCTTCAATCCCAGCCGCAGCTCCAAGCCCAGCAATTTCCTCAGCCTCTTTCCCAAACTTTACCTGTTCCCAACTTGCAGCAAAATGCTGAGCCAGTGTGGGCTGCTCTTGGACTAGGGGATGAGCCAGTTGAGGTGAAGAAGAGGGGCCCTGGTCGTCCTCGGAAGAGTGGGGTTGGAGTCGAAGGTGTGATGGGCCAAGCTGGCCCGGCGGCACGTAGAGGCCGTCCACCTGGTTCCAAAAATAGACCGGGAAGACCGAGGTTATCGAAAAGGCCTGGTCGTCCTCCCAAGCCCAAATCCCTGTCGAGTATCTCTAACGGGCTTAAGAGGCGGCCCGGTCGCCCGCCCAAAATCCAATCGAAACCAACGGTCATTCCCTTCGCTCCTCCGGTTCCCACCGTACCAGCCGTACCGCCAGGGGAAACCGTACCCGCTGTACAACCAAATATACCAATGGGTACCGCACCTACTGCCACCATACCTGTTGTATCTCCAAGGCCTAGAGGACGGCCGAAGAAGAATGCTTTATCAGTGTCTGCTTACGGAGCTGCACCACAAGCTGTTGCAGGTGTTGGTCGAGGTAGAGGCCGGGGCCGTGGACGCGGACGCGGACGTGGGGTTTTGGCGGCAGGAAGGTCCAAAAATCCCGGTGCTAGACCCGTGGGTCGGCCAAAGAAGGGAACGACTGCTGCTGCCGCTTCAGTAAATGCTGTTAATGATGATCTCAGGGGGAAGCTTGAATATGTTCAATCTAAAGTCAAGGAATCTCTTAGTGTGCTCAAGCGTCATTTTAACCATGAAAGTCCAGTCACTGCAATTGCAGCAATCCAAGAGTTGGAGATACTGTCAACAATGGATCTTAATGCACCATTAAGAGATGAATCACAGCAAGAGCAAGAGCAACAATTGCCAGAGCAACAGCTATTTCCACAACCACAGCAACAACCATTTGTGCAACCACAGCAAGTGCCAGAGCAGCAACAGTTTTATCTACAGGAATTGCCACAGCTACAGCTGCGGCCACAGCCACCGCAACTATTTCAGCCGCAAGGATCAGCCCCAAGTTAG 1614 0.5489 MDPTSIPPVTHTAPSPPFPAVAPPSTAVPFPPVSLPVPFPVPASAPVPIPAPAPAETNNHVAPTANADPSATAAPVPNHPPYADMIFSAIGALKEKNGSSKRAIAKYIEQVYRDLPPTHSSLLTHNLKRLKASGQLVMVKKSYKLPRSDASASTPQRGRGRPPKLKPQLQPQPQPQLLAQSQLQSQPQLQAQQFPQPLSQTLPVPNLQQNAEPVWAALGLGDEPVEVKKRGPGRPRKSGVGVEGVMGQAGPAARRGRPPGSKNRPGRPRLSKRPGRPPKPKSLSSISNGLKRRPGRPPKIQSKPTVIPFAPPVPTVPAVPPGETVPAVQPNIPMGTAPTATIPVVSPRPRGRPKKNALSVSAYGAAPQAVAGVGRGRGRGRGRGRGRGVLAAGRSKNPGARPVGRPKKGTTAAAASVNAVNDDLRGKLEYVQSKVKESLSVLKRHFNHESPVTAIAAIQELEILSTMDLNAPLRDESQQEQEQQLPEQQLFPQPQQQPFVQPQQVPEQQQFYLQELPQLQLRPQPPQLFQPQGSAPS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01763 537 SUPERFAMILY "Winged helix" DNA-binding domain 77 153 IPR036390 -
Bach8g01763 537 MobiDBLite consensus disorder prediction 471 507 - -
Bach8g01763 537 MobiDBLite consensus disorder prediction 9 25 - -
Bach8g01763 537 MobiDBLite consensus disorder prediction 141 191 - -
Bach8g01763 537 SMART AT_hook_2 229 241 IPR017956 GO:0003677
Bach8g01763 537 SMART AT_hook_2 271 283 IPR017956 GO:0003677
Bach8g01763 537 SMART AT_hook_2 156 168 IPR017956 GO:0003677
Bach8g01763 537 SMART AT_hook_2 291 303 IPR017956 GO:0003677
Bach8g01763 537 SMART AT_hook_2 252 264 IPR017956 GO:0003677
Bach8g01763 537 SMART AT_hook_2 347 359 IPR017956 GO:0003677
Bach8g01763 537 SMART AT_hook_2 400 412 IPR017956 GO:0003677
Bach8g01763 537 Gene3D - 75 157 IPR036388 -
Bach8g01763 537 PRINTS AT-hook-like domain signature 250 261 IPR017956 GO:0003677
Bach8g01763 537 PRINTS AT-hook-like domain signature 345 355 IPR017956 GO:0003677
Bach8g01763 537 PRINTS AT-hook-like domain signature 156 166 IPR017956 GO:0003677
Bach8g01763 537 MobiDBLite consensus disorder prediction 171 191 - -
Bach8g01763 537 FunFam Histone H1.2 75 154 - -
Bach8g01763 537 SMART h15plus2 76 142 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g01763 537 MobiDBLite consensus disorder prediction 260 276 - -
Bach8g01763 537 MobiDBLite consensus disorder prediction 54 77 - -
Bach8g01763 537 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 78 147 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g01763 537 MobiDBLite consensus disorder prediction 304 327 - -
Bach8g01763 537 CDD H15 77 155 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g01763 537 PANTHER HISTONE H1 51 354 - -
Bach8g01763 537 MobiDBLite consensus disorder prediction 1 25 - -
Bach8g01763 537 MobiDBLite consensus disorder prediction 225 415 - -
Bach8g01763 537 Pfam linker histone H1 and H5 family 79 141 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g01763 537 MobiDBLite consensus disorder prediction 469 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01763 Bach-Chr8 12687956 12691298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01763 55 160 Single Myb Histone (SMH) Gene Family AT1G49950 34.821 1.16e-08 54.7