Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01758 ATGAGAAAGCCTTGCTGCGAGAAGGAAGAAACTGATAAAGGATCTTGGTCCAAGCAAGAGGACCAAAAACTCATGGATTACATGAAAAAACACGGCGAAGGCGGTTGGCGCTCAATTCCTCAGGCTGCTGGGTTGCGCCGTTGTGGCAAAAGCTGCCGGTTGAGGTGGCTAAACTATCTAAAACCTCAAGTTAAACATGGAGACTTTGGAGAGGATGAAGAGGACTTAATCATCAGGCTTCATGCTCTTCTCGGCAACCGGTGGGCGCTAATAGCTGGAAGATTGCCAGGACGGACAGATAATGAAATCAAGCATCACTGGAATTCTCATATCAGGAAAAAGCTACTATACATGGGGCATGATCCCAATAATCTCCATGGCTTTCAAGGTTCTGTCCTTTCCACCAGTAAGTCAATTGGGCCCAAAACTAATGGGGTTCCGAAGCACGTAAGCTTGCATGTTGACATTCAGGTCTTGAATAATTCCACAAGTGATCATCGTGGTCCTGAGGGCAATATCAACAAATTTCCTGATTTAAATCTTGATCTGACATTAAGCACTTTCTCCAGAGAAGCAGAAGCACTTCAAGACTGA 594 0.4512 MRKPCCEKEETDKGSWSKQEDQKLMDYMKKHGEGGWRSIPQAAGLRRCGKSCRLRWLNYLKPQVKHGDFGEDEEDLIIRLHALLGNRWALIAGRLPGRTDNEIKHHWNSHIRKKLLYMGHDPNNLHGFQGSVLSTSKSIGPKTNGVPKHVSLHVDIQVLNNSTSDHRGPEGNINKFPDLNLDLTLSTFSREAEALQD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01758 197 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bach8g01758 197 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bach8g01758 197 SUPERFAMILY Homeodomain-like 13 107 IPR009057 -
Bach8g01758 197 Gene3D - 68 115 - -
Bach8g01758 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bach8g01758 197 SMART sant 65 113 IPR001005 -
Bach8g01758 197 SMART sant 12 62 IPR001005 -
Bach8g01758 197 CDD SANT 71 111 IPR001005 -
Bach8g01758 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bach8g01758 197 CDD SANT 15 60 IPR001005 -
Bach8g01758 197 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach8g01758 197 Gene3D - 13 65 - -
Bach8g01758 197 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 135 - -
Bach8g01758 197 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bach8g01758 197 FunFam Transcription factor RAX3 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01758 Bach-Chr8 12612743 12614469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01758 2 186 MYB Transcription Factor Family AT4G38620 51.232 1.25e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g01758 Myb_DNA-binding 4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01758 K09422 - zju:125422401 251.136