Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01738 GAGCGCTTCAATTAACATTCCATTATGTGAATCTAACCATATTCTCTTCTCTGCCAAACTTGAAGAAATCTATTCCCTCCTTGAGTTTGTTCCATCTCTCTCTCTCTCTCTCTCTCCCCTTCTTATTCAATTTCTCAATCATGCCTGTGGTTACAGATGCTTCAACAGTTGCAGAACACATCAAATGGAGAAGACCCAGAAACCAATTCAGTCATGCCATTGCAGAAACAGATCCAAACCCACAAATCCCTTCCATAATCCAATCCCCTCGCTGCAAATCCACGATTTCCTCTCTGCTTCTCTCTACTTTCTCTAACAACGGCTCCAATGAAACCATGCCGGGCAACATCAATGGCGGTGGCCATAATAACAAAAAGAAGAACAATTTTTCTGCAGCAAGTTTTAGAGGACTCGGATGCACTGCTGGCGTGTCGCAGCAGGTGTCGGTTCCGGCAGTGATTCGGACATCGGCGGATTGGCAGGGAAAGAAGACAAGAAAAAAGAAGCACAAAAGGAGTAATGCAAACAACAGCAAGACCGTTCAAGGCGTTCTTGATGGTTCAAATTCTGGGTCTGCTAATTGTGTCGATTTTCAAGATGTTTGGTGTGGCCCTGGAATTGGGTTTTCAGCGGATGCTGCTGCCTCGGTTGATTGCGTCGTGGCGAGGAAGAATGCGTCTACAAGAGGGAAGATTGACGTGGAGAAGATAAGCCACAGGGAGAGGGAGCGTCCCTCTTATTTAGGGAGGCGCACTGTAAGCCCAGAACCCATCTCATTTATGGACTCTGATCCTGACATTTTTGAAACGTGCCCTGGCTCTGATTCATGGGGAACTGCTAGATTCTATCGCCATATTCAGCCTTCATCCTCTGATGGTCTTTCCGGGATTGTGATGCTTCAAGGAAGTCTGCTGATGGGTGGAAGATTAGATTCACATGATCAATTTAGAGACTTGAGACTTGATGTTGACAACATGACATATGAGCAACTGCTTGAGCTTGGTGAGAGAATTGGTCATGTGAACACTGGACTTAAAGAAGATGAAATATGTTCAAATATCAGGAAAAGTAAGCCTCCAATCCTAATTAATACATCAATACCCCAACCTACTCAAGTTGACAAAAAATGCAGCATTTGTCAGGAAGAGTATGAAGCAGATGATGAGCTGGGGAAACTAAATTGTGGACATAGCTATCACGTACAATGTATAAGACAATGGCTTGCACAGAAGAACTTCTGCCCAGTCTGCAAGGCAGAAGTTATGGTTCGTCAACGAGTGGCACAATCCTGA 1292 0.4466 MPVVTDASTVAEHIKWRRPRNQFSHAIAETDPNPQIPSIIQSPRCKSTISSLLLSTFSNNGSNETMPGNINGGGHNNKKKNNFSAASFRGLGCTAGVSQQVSVPAVIRTSADWQGKKTRKKKHKRSNANNSKTVQGVLDGSNSGSANCVDFQDVWCGPGIGFSADAAASVDCVVARKNASTRGKIDVEKISHRERERPSYLGRRTVSPEPISFMDSDPDIFETCPGSDSWGTARFYRHIQPSSSDGLSGIVMLQGSLLMGGRLDSHDQFRDLRLDVDNMTYEQLLELGERIGHVNTGLKEDEICSNIRKSKPPILINTSIPQPTQVDKKCSICQEEYEADDELGKLNCGHSYHVQCIRQWLAQKNFCPVCKAEVMVRQRVAQS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01738 383 SMART ring_2 330 370 IPR001841 -
Bach8g01738 383 MobiDBLite consensus disorder prediction 112 136 - -
Bach8g01738 383 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 49 374 IPR045191 GO:0061630
Bach8g01738 383 ProSiteProfiles Zinc finger RING-type profile. 330 371 IPR001841 -
Bach8g01738 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 380 IPR013083 -
Bach8g01738 383 Pfam Ring finger domain 329 371 IPR001841 -
Bach8g01738 383 SUPERFAMILY RING/U-box 324 377 - -
Bach8g01738 383 FunFam E3 ubiquitin-protein ligase rnf12-A 294 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01738 Bach-Chr8 12447236 12451487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01738 2 282 C3H Transcription Factor Family AT1G73760 39.731 2.96e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01738 - - qsa:O6P43_005125 526.168