LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g01728	ATGGCTGCCAAACGCTTTCTTGATGATTCTGATCCTGGTCCAGATAAGCCAAACGACAAACGCATGAGACCTGATACTACTACTAGTACCAGACCTTCTTTTGCTTCGGTAATAGGAGAAATGGTCATGGTCAAAAACTTGCAGAACCTTTTCTCTGGCTTGGAACCTTTGCTTAGAAAAGTGGTGAATGAAGAGGTAGAGCGTGCCATGCAACATTGTTGTCCACTCTCAATAACTAGGTCTCCTCCTTTAAGAATTCAAGCCGTGGAGCAACCTTCAAGCTTGCAGTTAATGTTTAGCAAGAAGCTTTCTCTGCCTATATTCACTGGCAGCAGGATACTTGATATTGATGGGAACCCTGTGACCATCATCCTTGTCGACAAGAACGGTGATCAAATTGTTCGCACAAGTCTCCCTCACCCGATTAAGCTCGAAATCGTTGTTCTTGATGGAGATTTCCCACCTGGGGATAATGAGGCATGGCCTAGTGAGCAATTCAACAGCCACATAGTGAAGGAGAGAACTGGGAAGCGACCGTTGCTTACAGGAGAGTTGAATATAACCATGAGGGATGGAATTGCACCATCTGGGGACCTTGAGTTTACTGATAACTCTAGCTGGATTAGGAGCAGGAAATTTAGGGTTGCGGTGAGATTGGCTGCTGGGAGCAATCAAGGTGTCCGAATTCGTGAAGCCATGACTGAAGCATTTGTCGTTAAGGATCATCGTGGAGAATTGTACAAGAAGCACCATCCACCAATGTTGCATGATGAAGTTTGGCGCCTAGAGAAGATAGGAAAAGATGGAGCTTTCCACAAAAAGTTATCTGATGAGGGAATTAAAACGGTGCAAGACTTTCTCAAACTATCGGTGGTTGACCCTAACAAGCTCAGAAAGGTTTTGGGGATTGGGATGTCAGATAGAATGTGGGATGTGACAATCAAGCATGCAAAGACTTGCAACATGGGAAACAAGCTTTATGTGCACCGTGGATCTCAGTTCACTCTCCTTCTGAATCCTATCTGCCAAGTGATTAAAGCTGAAATCAATGGCCAAAATATTATTCCTGCCAGAGAGCCGACCAATCTGAATAGGAGCTATATAGAGAAACTGGTCAGAGATGCATATGTGAGATGGAATACCTTGGAGGAAATTGATTCAGTTTTGAATGATAACATGTCCTTATTAACACTAGGTGAAAATATGGAGCAGTATCCAAACAACAACATCAACCATCAATCATGGATGGTGGCATACGGTGAGCCAAACGATTACTATGGGGATAATAAAACATCAATAGAGGCGACTGCAGGCCCTGGCTCTAGCTCTAGCTCTGCCTCTGGCAGCGATTGGGTTATGAATTCTACATATGGAGCAACATCACCATTCGGGAGTGGTGCCATTTCTTATAGCTTCTCTGAGTCCCAATCTGATGGTGATATAACCCCTTCAATTAGGTGGAATTAA	1467	0.4397	MAAKRFLDDSDPGPDKPNDKRMRPDTTTSTRPSFASVIGEMVMVKNLQNLFSGLEPLLRKVVNEEVERAMQHCCPLSITRSPPLRIQAVEQPSSLQLMFSKKLSLPIFTGSRILDIDGNPVTIILVDKNGDQIVRTSLPHPIKLEIVVLDGDFPPGDNEAWPSEQFNSHIVKERTGKRPLLTGELNITMRDGIAPSGDLEFTDNSSWIRSRKFRVAVRLAAGSNQGVRIREAMTEAFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSDEGIKTVQDFLKLSVVDPNKLRKVLGIGMSDRMWDVTIKHAKTCNMGNKLYVHRGSQFTLLLNPICQVIKAEINGQNIIPAREPTNLNRSYIEKLVRDAYVRWNTLEEIDSVLNDNMSLLTLGENMEQYPNNNINHQSWMVAYGEPNDYYGDNKTSIEATAGPGSSSSSASGSDWVMNSTYGATSPFGSGAISYSFSESQSDGDITPSIRWN	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g01728	488	Pfam	Calmodulin binding protein-like N-terminal domain	95	242	IPR046831	-
	Bach8g01728	488	MobiDBLite	consensus disorder prediction	1	26	-	-
	Bach8g01728	488	PANTHER	OS02G0177800 PROTEIN	1	445	IPR012416	GO:0005516
	Bach8g01728	488	Pfam	Calmodulin binding protein central domain	254	320	IPR046830	-
	Bach8g01728	488	MobiDBLite	consensus disorder prediction	1	32	-	-
	Bach8g01728	488	Pfam	Calmodulin binding protein C-terminal domain	325	385	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g01728	Bach-Chr8	12352920	12355263	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g01728	3	418	Calmodulin-binding Proteins	AT5G57580	47.529	6.05e-124	374

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g01728	-		-	qsa:O6P43_005112	621.698