Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01725 AGCGATTTCAATAGAGAGAGAAAAAAGAGCATGGCGACGCCGTTAACGGGATTACAGCACTTGGACGGAGGTGGAGGAGTGGCGGTGCTGTCGAATTCTGTGAACAAGGTCGATTCTTCCTCGCCCTCATCGTCTACCTCCAATGGTGGCTTGAAGTGCTCCAAATTGGATTCGTCGCCAATTTTGATTTTCCGGTTCTTCCATAAAGCGATTCGGAATGAGCTTGATGTCTTGCATCGATTAGCCATGGCATTTGCCACGGGAAATCGCTCTGATATTCAGCCGCTGCTAGAACGTTACCGTTTCCTGAGATCGATTTATAGGCACCATTCTAATGCTGAAGATGAGGTCATTTTTCCAGCTCTTGATATACGTGTCAAGAATGTAGCACAGACATATTCTCTTGAGCACGAGGGTGAAAGCAATCTTTTTGATCATCTATTTGAGTTGTTAAATTCTAGCACCCAAGACGAAGAAAGTTTTCCAAGGGAGTTAGCGTCCTGTACAGGAGCTCTGCAGACATCAGTTAGTCAACACATGGCTAAGGAAGAAGAGCAGGTATTTCCATTGCTCATTGAGAAGTTTACACTAAAGGAACAAGCATCTTTAGTTTGGCAGTTCTTGTGTAGTATTCCTGTGAATATGATGGCAGAATTTCTTCCATGGCTTTCAAAATCTATATCACCCAATGAATCTCAAGATTTACGGAAGTGTTTAAGCAAGATAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTCATTTTCACCTGGATGGAAGGGAAATGTGGTGCTAACAGGGTTGAAAGTTGTGTAGATCATTCTCAGGTTCAATGTTGTCGTAGCCCATTATTCGGTCAGATTGAGAAAGTAAACTGTGCTTGTCAGTCCACAACAACTGGGAAGAGGAAATTTGTTGAGTCTAGTGTAGATGCTTCTGATGCCACTGGCACACATCCTATAGATGAAATATTGCTCTGGCACAATGCAATTAAAAAAGAGTTGAGTGAGATAGCAGTGGAGACAAGAAAGATGCAAAATGCTGGAGATTTTACCAATCTATCAGCTTTTAATGAAAGATTACAATTTATCGCTGAAGTTTGCATTTTCCACAGTATTGCTGAGGACAAGGTTATATTTCCAGCAGTGGATGGAGAATTTTCATTCTCTCTGGAGCATGCTGAAGAGGAAAGCCAATTTAATGACTTCAGGTGTTTGATTGAAGGTATTCAAAGTGAAGGAGCAACATCTAATTCAGAAGCTGAATTTTATTCAAAATTATGCTCACACGCTGATCATATAATGGAAACCATACAGGGGCATTTCCATAATGAAGAAACTCAGGTTCTTCCACTTGCTCGGAAGCATTTTAGCTTCAAAAGGCAACGTGAACTTCTGTACCAAAGCTTGTGTATGATGCCTCTAAAACTGATTGAACGTGTCCTGCCGTGGTTGGTGGGATCATTACCTAAAGATGAAGCTAGGACGTTTCTGCAAAACATGCAATTAGCAGCTCCAGCAACAGATTCTGCTCTAGTCACACTCTTCTGTGGTTGGGCTTGCAAAGCTCATAATGAGGGTTTGTGTTTGTCTTCAAGTGCATCAGGTTGCTGTCCTGCTCAAAGACTTGCTGATATTGAAGAAGATTCTGTTCAGTCATCATGTGCATGCGCTTCTGCATCATCTGCTAGAGATTGCTTAGTATCAGCTGAATCAGATGAGAACAAAAGACCAGTCAAGCAAAGCATATTGGAGTTATGCAAGAATGGAGACATTTCTAAAACTTCAGTGACTGAAAGTATCCAGAAAGAACGCTGTAATGCTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTCAGCAGTAGTAATCTGGGATTCAGTTCTCTATCTACTGCCAAGTCTTTACGTTCCTTGTCTTTCAGTTCTTCTGCCCCATCTCTTATTTCCAGTCTTTTCATATGGGAAACAGATAACAGCTTATGTGATGTTGGCTCTGCAGAAAGACCAATTGATACTATATTTAAATTCCATAAAGCTATTCGAAAAGACTTGGAGTATTTGGATGTTGAATCTGGAAAGCTTAATGCTGGTGATGAGACAATTCTTCGGCAGTTTAGTGGGAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGACATAGTATTTCCAGCATTAGAATCCAAAGAGGCACTTCATAACGTGAGTCACTCATACATGCTGGACCATAAGCAGGAGGAAAAATTATTTGAAGACATTTCCTGTGTTCTTTCCGAGCTTTCTGTCCTTCATGAAGGTTTGCAGATGACCCATATGTCAGCGGATTTAAGTCAACGTGATTGTGAAATTTCTGATGTAAATTGTAATGATAATATCAGAAAGTACAATGAGCAAGCGACTAAGCTTCAAGGAATGTGTAAATCCGTAAGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAAAGCCAGCTGTGGCCATTATTTGGCAAACATTTCACTGTGGAAGAGCAAGACAAGATAGTGGGTCGGATAATTGGAACCACAGGTGCTGAAGTTCTTCAATCAATGTTACCATGGGTAACTTCTGCGCTTACTCAGGATGAACAGAATAAAATGATGGACACATGGAAGCAGGCAACTAAGAATACTATGTTCAATGAATGGCTTAGTGAATGCTGGAAAGAGAGTCCAGCATCTACATCACAGACAGAAACATCAGAGCCTGGCACTTCTCGACGAGGTGCTGAATATCAAGAAAGCTTGGACCAGAATGATCAGACGTTCAAGCCTGGTTGGAAAGACATATTCCGGATGAATCAGAATGAACTTGAGTCAGAGATCCGGAAAGTTTATCGGGACTCAACTCTTGATCCAAGGAGAAAAGCTTATCTTGTGCAGAATCTAATGACTAGTCGCTGGATAGCTGCACAGCAGAAGTTACCTAAAGCTATAGCTGGGGAATCTTCTAATGGTGAAGAATTAGAAGGACGCACACCATCATTTTGGGACACAGAGAAACAAGTATTTGGCTGTGAGCACTACAAAAGAAACTGTAAACTTCGAGCTGCATGTTGTGGGAAGTTGTTTACTTGTAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACTTCAGAAATGATGTGTATGCATTGTCTGAACATACAACCAGTTGGGCCTATATGCATGACACCCTCATGTAACAGACTTTCAATGGCAAAGTACTATTGCAATATATGCAAATTTTTTGATGATGAAAGAAATGTATATCATTGCCCATTTTGCAATTTATGCCGTGTTGGAAGAGGGCTTGGGATTGATTATTTTCATTGCATGAAATGCAATTGTTGCCTGGGAATAAAATCAACATCACACAAGTGCTTGGAGAAAGCTTTGGAAATGAACTGCCCAATTTGCTGTGACTTCCTGTTCACATCCAGTGCAACAGTCAGAGTTCTACCTTGTGGCCATTACATGCATTCAGCTTGTTTTCAGGCGTATACTTGTAGCCACTATACATGCCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCTTTGTTGGCTGCTGAGGAGCTTCCCGAAGAGTACAGGGACCATTATCAGGACATACTTTGCAATGACTGTGACCGGAAGGGCACTTCACGTTTCCACTGGTTATATCACCAGTGTGGATTTTGTGGCTCGTATAATACCCGGGTTATCAAGGGTGAGACAAGAGATTCCCCCTGTTAA 3774 0.4155 MATPLTGLQHLDGGGGVAVLSNSVNKVDSSSPSSSTSNGGLKCSKLDSSPILIFRFFHKAIRNELDVLHRLAMAFATGNRSDIQPLLERYRFLRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHEGESNLFDHLFELLNSSTQDEESFPRELASCTGALQTSVSQHMAKEEEQVFPLLIEKFTLKEQASLVWQFLCSIPVNMMAEFLPWLSKSISPNESQDLRKCLSKIVPEEKLLQKVIFTWMEGKCGANRVESCVDHSQVQCCRSPLFGQIEKVNCACQSTTTGKRKFVESSVDASDATGTHPIDEILLWHNAIKKELSEIAVETRKMQNAGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGEFSFSLEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCSHADHIMETIQGHFHNEETQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSLPKDEARTFLQNMQLAAPATDSALVTLFCGWACKAHNEGLCLSSSASGCCPAQRLADIEEDSVQSSCACASASSARDCLVSAESDENKRPVKQSILELCKNGDISKTSVTESIQKERCNARSCCVPGLGVSSSNLGFSSLSTAKSLRSLSFSSSAPSLISSLFIWETDNSLCDVGSAERPIDTIFKFHKAIRKDLEYLDVESGKLNAGDETILRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDISCVLSELSVLHEGLQMTHMSADLSQRDCEISDVNCNDNIRKYNEQATKLQGMCKSVRVTLDQHIFREESQLWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLSECWKESPASTSQTETSEPGTSRRGAEYQESLDQNDQTFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKAIAGESSNGEELEGRTPSFWDTEKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMHCLNIQPVGPICMTPSCNRLSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSTSHKCLEKALEMNCPICCDFLFTSSATVRVLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDHYQDILCNDCDRKGTSRFHWLYHQCGFCGSYNTRVIKGETRDSPC 1247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01725 1247 SUPERFAMILY RING/U-box 1130 1177 - -
Bach8g01725 1247 SUPERFAMILY Zinc hairpin stack 1069 1125 IPR037275 -
Bach8g01725 1247 SMART ring_2 1132 1173 IPR001841 -
Bach8g01725 1247 ProSiteProfiles Zinc finger CTCHY-type profile. 1068 1131 IPR017921 -
Bach8g01725 1247 Pfam Zinc-ribbon 1179 1236 IPR039512 -
Bach8g01725 1247 CDD Hr-like 310 439 - -
Bach8g01725 1247 Gene3D - 1203 1243 - -
Bach8g01725 1247 ProSiteProfiles Zinc finger RING-type profile. 1132 1174 IPR001841 -
Bach8g01725 1247 CDD Hr-like 658 818 - -
Bach8g01725 1247 Gene3D nmb1532 protein domain like 652 894 - -
Bach8g01725 1247 CDD Hr-like 53 179 - -
Bach8g01725 1247 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 699 1241 - -
Bach8g01725 1247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1125 1176 IPR013083 -
Bach8g01725 1247 Pfam CHY zinc finger 1003 1078 IPR008913 GO:0008270
Bach8g01725 1247 MobiDBLite consensus disorder prediction 886 918 - -
Bach8g01725 1247 Gene3D nmb1532 protein domain like 49 199 - -
Bach8g01725 1247 Gene3D nmb1532 protein domain like 310 457 - -
Bach8g01725 1247 Pfam Hemerythrin HHE cation binding domain 656 819 IPR012312 -
Bach8g01725 1247 Pfam Hemerythrin HHE cation binding domain 307 441 IPR012312 -
Bach8g01725 1247 Pfam Hemerythrin HHE cation binding domain 53 181 IPR012312 -
Bach8g01725 1247 FunFam Zinc finger protein-related isoform 1 1127 1176 - -
Bach8g01725 1247 Pfam Ring finger domain 1131 1173 IPR001841 -
Bach8g01725 1247 SUPERFAMILY CHY zinc finger-like 997 1059 IPR037274 GO:0008270
Bach8g01725 1247 ProSiteProfiles Zinc finger CHY-type profile. 996 1065 IPR008913 GO:0008270
Bach8g01725 1247 CDD RING-H2_Pirh2-like 1131 1174 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bach8g01725 Bach-Chr8 12316860 12324862 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01725 1 1247 C2H2 Transcription Factor Family AT3G18290 67.516 0.0 1706
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01725 K16276 - qsa:O6P43_005106 2097.78