Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01720 ATGTCATCCCCTTCTTCTTCTTCTTCTTCAAAGAGCATTAGCAGCTCTAGTGAAGACGACAATGAGCTCAGAAAAGGACCTTGGACCCTTGAAGAGGATACTCTGCTCACTCAATACATCACTAATCACGGAGAAGGGTCTTGGAATCTGCTCGCAAAACGTTCAGGTTTGAGAAGAACTGGAAAGAGTTGCAGACTGAGATGGTTAAACTATCTAAAGCCAGATGTAAAGCGTGGAAATTTAACTCCTCGAGAGCAGCTTTTGATTCTTGAACTCCATTCCAAATGGGGCAACAGATGGTCAAAGATAGCAAAGCATTTGCCGGGGAGGACAGACAATGAGATCAAGAACTATTGGAGAACACGGGTGCAGAAGGTAGCAAGACATCTGAAGATTGGCACAGACAGCATTGAATTTCAGAAACTGGTTAGGGGATTCTGGGTGCCAAGGTTGATGCAGAAAGCAAGAGAATCATCTTCTTCTTCAGCCATGTCGCTCCAAGACCAACCAATTCCTCTGCTTCTCGACTCTGTTTCTGATCAGTATTCAGCAGTCGGGACAATCCCACCACAGATTCCAGATTTCAGTTTTTTGGATGAGCAGAAAGACAAATCAGACTTGGACTACAACATGGGTTTTTCAGAATCAGCTAATACTGCAATTCTTCCTCAGTTCTTGGGATCGACTACCACTCATTTTCATGACTTGGGAAACAGTGACATGAACACATTTATGTCTGATGGCTACTCTGTCAATAACAATGTCTGCGACATGGAATCCTACAACCTCGAAGCTACAATAGCAGCGGCTCAGGATATGGAATGCCATGTGGGTGACTGCCAAGTGGCACAGAGCGATTGGATGAACAATGATTTTTCATGTGGCACTTGGAACATGGATGAATTATGGCAGTTTAATTACTCACAGAACTGA 933 0.4384 MSSPSSSSSSKSISSSSEDDNELRKGPWTLEEDTLLTQYITNHGEGSWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNLTPREQLLILELHSKWGNRWSKIAKHLPGRTDNEIKNYWRTRVQKVARHLKIGTDSIEFQKLVRGFWVPRLMQKARESSSSSAMSLQDQPIPLLLDSVSDQYSAVGTIPPQIPDFSFLDEQKDKSDLDYNMGFSESANTAILPQFLGSTTTHFHDLGNSDMNTFMSDGYSVNNNVCDMESYNLEATIAAAQDMECHVGDCQVAQSDWMNNDFSCGTWNMDELWQFNYSQN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01720 310 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 201 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach8g01720 310 Gene3D - 25 77 - -
Bach8g01720 310 Gene3D - 82 123 - -
Bach8g01720 310 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Bach8g01720 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Bach8g01720 310 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Bach8g01720 310 FunFam Myb transcription factor 25 77 - -
Bach8g01720 310 CDD SANT 27 72 IPR001005 -
Bach8g01720 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
Bach8g01720 310 MobiDBLite consensus disorder prediction 1 24 - -
Bach8g01720 310 FunFam MYB transcription factor 81 123 - -
Bach8g01720 310 MobiDBLite consensus disorder prediction 1 16 - -
Bach8g01720 310 Pfam Myb-like DNA-binding domain 78 121 IPR001005 -
Bach8g01720 310 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Bach8g01720 310 CDD SANT 82 121 IPR001005 -
Bach8g01720 310 SMART sant 77 125 IPR001005 -
Bach8g01720 310 SMART sant 24 74 IPR001005 -
Bach8g01720 310 SUPERFAMILY Homeodomain-like 23 119 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01720 Bach-Chr8 12280221 12281386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01720 20 305 MYB Transcription Factor Family AT1G68320 49.495 4.13e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g01720 Myb_DNA-binding 5.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01720 K09422 - gmx:778045 398.282