Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01719 ATGGCTCAATACACAGCAGATCTGCAAAGCTTTAAACCCTCATTTCCTTTCCTTGACATTGATCCAAGCATGGAACTCATAAATCAGCTCACAGGGATGACTTCAAATATCCTTGATTACTCAAACCTGCAGACCTTGATCCCATTCACCAGTGATAGCCTCTTGGACCCTCCAGAACCTGAATTCAGAGGAAACTTAGAAGAAAATCTCTCAGGTATTCTCCACCATTTCAACCACAATTCATTGCCAGCTTCCCTTCCCATTATTCCATCAGAAAATGAATTCCAGGAAATCAGAAAAAGGAAAACAATGGATTTTCCAGAGATCAGTTCTGCAAACTCAACTCCACAGGTTTCTGAATCAGAAAGCAAGATCAAAACTAGTTTTGGAAGAGGTAAAAGAGCAAAGGGCACTGCCGCAGAAGAAGATAAACCAACGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGATAGTCACAGTATAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAATTAAAGTGCTTACAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTAGATGAGATCATAAACTATGTCCAATCCTTACAGCATCAAGTGGAGTTCCTCTCTATGAAGCTTACTGCAGCAAGTTCTTATTATGACTTCAATTCAGAGACAGATACTTTAGAAACAATGCAGAGAAGAAGGGCATCCGAGGCAAAAGAATTGGCCAAATATATGAGAGAAGGATATGGAGAGGTTACCAGTTATCAACCAAGTTGGTCCTTTTGA 807 0.4064 MAQYTADLQSFKPSFPFLDIDPSMELINQLTGMTSNILDYSNLQTLIPFTSDSLLDPPEPEFRGNLEENLSGILHHFNHNSLPASLPIIPSENEFQEIRKRKTMDFPEISSANSTPQVSESESKIKTSFGRGKRAKGTAAEEDKPTEVVHVRARRGQATDSHSIAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASSYYDFNSETDTLETMQRRRASEAKELAKYMREGYGEVTSYQPSWSF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01719 268 MobiDBLite consensus disorder prediction 109 125 - -
Bach8g01719 268 MobiDBLite consensus disorder prediction 135 162 - -
Bach8g01719 268 MobiDBLite consensus disorder prediction 109 162 - -
Bach8g01719 268 Pfam Helix-loop-helix DNA-binding domain 161 208 IPR011598 GO:0046983
Bach8g01719 268 Gene3D - 154 226 IPR036638 GO:0046983
Bach8g01719 268 Coils Coil 234 254 - -
Bach8g01719 268 SMART finulus 163 213 IPR011598 GO:0046983
Bach8g01719 268 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 112 235 IPR024097 GO:0006355
Bach8g01719 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 207 IPR011598 GO:0046983
Bach8g01719 268 FunFam transcription factor BEE 3-like 154 225 - -
Bach8g01719 268 CDD bHLH_AtBPE_like 147 232 - -
Bach8g01719 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 225 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01719 Bach-Chr8 12268198 12269688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01719 70 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 50.000 6.96e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach8g01719 HLH 3.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01719 - - gmx:100806942 371.703