Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01707 ATGATAACAGAAATGAAAGCAGCAAACGCTTTGGGGGCGAGAACATCACGAGCCTGTGATAGCTGCCTCCGCAGTCGGGCACGTTGGTTTTGTGGTGCAGATGATGCTTTCCTCTGCCACGCCTGTGATACGTTAGTTCACTCAGCCAATCAATTAGCCAGCAGACACGAAAGGGTTCGGCTTCAAACTGCTTCCTGCAAGGTCAACTCCTCAGTGACCCCAAAGAAGCTGACTGCACAATCATGGCACAGTGGATTCACACGCAAGGCAAGAACCCCACGTCATAACAAGCTTTTATTGGGGCAACAACACAAACATGAACTGGAAGAAGAAGAAGAAGAAGGTTTGCTTTTGGACAGCTGTAACAGTGTTCTTCCTGTTGTTCCTGACCTTGCACGTGAAGAGCCTGTGCTGGAGGAGACAGAGGAGCAGCTGCTATGTCGTGTGCCAGTTTTTGACCCTTTTGATGCTGGGCTTTGCAGTTTATACAGTGAGATTGGCGATGAGAAATTGGACACCACCACCACCATGAAGAAAGAGACTGAAGAAACCTGTGAGTTGGATAATTTATCTGAGTTTCTTCCATCTGATATGGATCTTGCAGACTTTGCTGCTGATGTAGAGAGCTTGCTGGAAAGTCGGCTCGATGAGGATTCTGGTGAGGTGAAAGATTCAGAACTGTTTGATTGTAAAGAAGAAGAAGGAGAAGGTGTAGGTATATATTTGGGAGTGAGAGCAGAAAGTAATACAATGGTAAGGGTTAAGGATGAACAAGTAGAAGCTGTTTCAACTTGTGATCATTTGGACTCAGTTCTGGACATGGAGACCTTAAGTTGGAACATTGAATCAGAATCATTAGATGATGTATTGCAGGAAAAGAAGGAGAAGATGATGGTTCCGGTTCCGGCGGCGAATGACGGCGATAATGTTGGTAAATTGGGAACAAAGAGGAAGATATTTTTGAGGCTTAACTATGAGGATGTCATTTCTGCTTGGGCCAGCCAAGGCTCTCCTTGGACAACAGGAAACCCACCTCAGTTTATTTCTAGTGATTGCTGGCTAGATTGTTTGGGCTCAAGTGGTGCAGATGTTCAGCAGTGTTATGGGGAAGTGGGAAGCTTAAGGGGGCAGCTAGTAGGGAGAGGAGATGGGGGAAGAGAGGCAAGAGTGTCAAGGTACAGAGAGAAGAGAAGGACACGTTTGTTTGCAAAGAAAATAAGGTATGAAGTGAGGAAATTGAACGCAGAGAAGAGACCTAGAATGAAAGGTCGTTTTGTGAAGAGAAGTTCCTTTGTTGGAACTACTACTGCTTTTCCTTGCCATTAA 1326 0.4548 MITEMKAANALGARTSRACDSCLRSRARWFCGADDAFLCHACDTLVHSANQLASRHERVRLQTASCKVNSSVTPKKLTAQSWHSGFTRKARTPRHNKLLLGQQHKHELEEEEEEGLLLDSCNSVLPVVPDLAREEPVLEETEEQLLCRVPVFDPFDAGLCSLYSEIGDEKLDTTTTMKKETEETCELDNLSEFLPSDMDLADFAADVESLLESRLDEDSGEVKDSELFDCKEEEGEGVGIYLGVRAESNTMVRVKDEQVEAVSTCDHLDSVLDMETLSWNIESESLDDVLQEKKEKMMVPVPAANDGDNVGKLGTKRKIFLRLNYEDVISAWASQGSPWTTGNPPQFISSDCWLDCLGSSGADVQQCYGEVGSLRGQLVGRGDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRSSFVGTTTAFPCH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01707 441 Pfam CCT motif 386 428 IPR010402 GO:0005515
Bach8g01707 441 ProSiteProfiles CCT domain profile. 386 428 IPR010402 GO:0005515
Bach8g01707 441 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 7 430 - -
Bach8g01707 441 SMART bboxneu5 14 61 IPR000315 GO:0008270
Bach8g01707 441 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Bach8g01707 441 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Bach8g01707 441 CDD Bbox1_BBX-like 18 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01707 Bach-Chr8 12176451 12178037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01707 8 428 C2C2-CO-like Transcription Factor Family AT1G25440 42.396 8.88e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach8g01707 CCT 1.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01707 - - gmx:100802113 460.299