Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01689 ATGCATCTTGCTCTGATGGGACTTGTAGTTGGAAACAAGCATTTACTGAAGAAATCTACAGTACTTGCTATATCTCTTAAGTTAATCAAGTTGTGTGTCTTTTCTGGTGTTCAAAGCCTTTCTTCTAGTGTGCAAAGCACTCCAGAGAAGAATGGTCACTCAGATGATGCTTCAAGAAGTCCAGAACTCCTTCAGGAATTCTTGAAATCTGGTCCAAAGAAGGAACTTCTTCGAACATGCTTTGATAAGGACAAAAGGAACATTTCACCCAAAAGCAGGATAATGGATACTAAGTTAACCAGTAAGATAAGCAAGAAACAGGACATGAAAAAGGCTTCCAGTCTCAGCAACCAGTCCTTTGGGAAGCAACACAGAAAGGGTGAAAACCCCACTAGACTCATGCCAGCTCCTGACATTTCTTCTGATTTTGGAAATTCAAACTCCTGGATCTGTAAAAATTCTGCTTGTAGAGCTGTTTTATCAATAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATTTGCCACCTTTTTGATGATAACAAGGATCCCAGTCTTTGGCTGGTATGCACATCTGAATCTGCTCGTGGAGATTCATGTGGACTATCATGTCACATAGAGTGCGCTCTTCAGCATGAAAAAGTGGGAGTTGTTGATCATGGGCAGCTGATGCAACTAGATGGTAGTTATTGTTGTGCATCGTGTGGTAAGGTTTCGGGGATACTTGGATGTTGGAAGAAACAGCTAACTATAGCAAAAGATGCTCGGCGTGTAGATATACTCTGTTATAGGATATATTTGAGCTACAGGCTTTTGCATGGGACTTCAAGGTTTAAAGAACTTCACGAAATTGTAGAAAATGTGAAGGCTAAACTTGAAACAGAAGTTGGTCCTGTGAATGGAGTTTCTTCCAAGATGGCACGAGGCATTGTCAGCAGACTCTCTATAGCTGGTGATGTACAGAAACTCTGCTTTCTTGCAATTAAGAAAGCTGATGAGTGGTTGGCCACTATTTCTAATGTGGATCCGGAATCTGGAGAGGGTTCACTTCCTGCTGCCTGCAAGTTTTTCTTCGAAGAAGTTTCATCTTCCTCAGTCATAATCATATTGGTTGAAATGCCAAATCCATCTTCTGAGGACATTAAAGGCTACAAGTTATGGTATTATAGGAGTAGGGAGGAGTCACACTCAAAAGATCCTGTTTGTGTGTTTCCAAGATCTCAGAGGAGGATATTGATATCCAATCTCCAGCCTTGCACAGAATATACTTTTCGGATTATATCCTATGCAGATAGTGGTGACCTGGGTCATTCTGAAGCCAAGTGTTTCACCAAGAGTATTGAGATAATAAACAAAAACACTTCTTCATTAGTTACTTCGAATCATAAGAAAGAAAACCATCAAAGTGGAGGCAGTTCTGTCTCTAAATCTGAGCATAATCCTGGTATAGGAGATTCTGGATTTAAGGTTCGAGATCTTGGAAAAATCTTATATCTTGCTTGGGCTCAAGAACAAGTTTGTGTTGAGGGATTTTGCCATGCTGATGTGAAAAACTGCTGTGGAGGAAGCAAAATGGTCAAACCTGAAACTCAAGAAGAGCGGTTGCCGCCAGTTTCACGTGGTCTGGATTTAAATGTTGTTTCAGTGCCTGATCTGAATGAAGAATTGACGCCTCCTTTTGAGTCTTCAAGGGATGAAGATAATGGTTGCACCTTGCAGCAGGCTGTTGAGGCAGATGATGATGCTGCTTCTCATGATGTTGAGAAAAATGGTTTAGCAACAAGATCAAATGGTAGTGGTGACTCTCAAACCTGGTCACATGGACCAGGTAGGGAATTGCTGGCTGTTGATTCCTGTGGAGATTTAAATAGGAAAAGGGCAGCAAGCACGAATGAAGAGATGCATGATTGTGACAGCACTTTGATAAATGGTTCTCCTTTACACATATCGGATGGTATATGTTCCTTGGATGAGAACTTCGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGCCATATCAAACAAGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCAACAGAGCAAGAACGTAGGGTGGTTAATACCTTTATTCAAACTCTAATCGACGATCCAAGTAGTTTGGCAGGACAACTGATCCACTCCTTTTCTGATATTATATCCAGCAAGAAGCCAAGAAATGGATTCTGTAGTAAGCTGTGGCATTAA 2226 0.4093 MHLALMGLVVGNKHLLKKSTVLAISLKLIKLCVFSGVQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDKRNISPKSRIMDTKLTSKISKKQDMKKASSLSNQSFGKQHRKGENPTRLMPAPDISSDFGNSNSWICKNSACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESARGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGSYCCASCGKVSGILGCWKKQLTIAKDARRVDILCYRIYLSYRLLHGTSRFKELHEIVENVKAKLETEVGPVNGVSSKMARGIVSRLSIAGDVQKLCFLAIKKADEWLATISNVDPESGEGSLPAACKFFFEEVSSSSVIIILVEMPNPSSEDIKGYKLWYYRSREESHSKDPVCVFPRSQRRILISNLQPCTEYTFRIISYADSGDLGHSEAKCFTKSIEIINKNTSSLVTSNHKKENHQSGGSSVSKSEHNPGIGDSGFKVRDLGKILYLAWAQEQVCVEGFCHADVKNCCGGSKMVKPETQEERLPPVSRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDVEKNGLATRSNGSGDSQTWSHGPGRELLAVDSCGDLNRKRAASTNEEMHDCDSTLINGSPLHISDGICSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLIHSFSDIISSKKPRNGFCSKLWH 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01689 741 CDD PHD_VIN3_plant 171 235 - -
Bach8g01689 741 ProSiteProfiles Fibronectin type-III domain profile. 350 449 IPR003961 GO:0005515
Bach8g01689 741 CDD FN3 358 434 IPR003961 GO:0005515
Bach8g01689 741 MobiDBLite consensus disorder prediction 101 132 - -
Bach8g01689 741 Pfam Fibronectin type III domain 358 435 IPR003961 GO:0005515
Bach8g01689 741 SUPERFAMILY Fibronectin type III 356 441 IPR036116 GO:0005515
Bach8g01689 741 MobiDBLite consensus disorder prediction 110 124 - -
Bach8g01689 741 Gene3D Immunoglobulins 351 447 IPR013783 -
Bach8g01689 741 PANTHER VIN3-LIKE PROTEIN 2-RELATED 40 741 IPR044514 GO:0010048|GO:0040029
Bach8g01689 741 MobiDBLite consensus disorder prediction 458 480 - -
Bach8g01689 741 MobiDBLite consensus disorder prediction 591 606 - -
Bach8g01689 741 MobiDBLite consensus disorder prediction 458 484 - -
Bach8g01689 741 Pfam PHD - plant homeodomain finger protein 151 269 IPR032881 -
Bach8g01689 741 MobiDBLite consensus disorder prediction 591 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01689 Bach-Chr8 11931713 11934516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01689 147 734 PHD Gene Family AT3G24440 49.003 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01689 - - gmx:100780157 1140.18