Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01643 ATGAATCAACTGTGTTTTCGCCTTTTGATTCTCTGTGCTATATTATCCAGGTTCTGCTGCAAAGCACAGACTTCAGAAGTTCCAGATCCAGAAGATGGCATACCTAATTTTCAACCAAGCCTTGCTGTTGTCCTAGGAATTCTGTGTCTCATGTTTCTGCTCACAATCATTATTCTCATGTACGCAAAATTCTGTCAGCAGAGAGCTTCAGTTCATGAAGACCTAGAAACTCACCCTACACTTATAAGTTCAAGGTCAAGATTTTCAGGAATTGATAAGACTGTCATAGAATCTCTACCCTTCTTCAGATTTTCTTCCCTCAGAGGCTCTAGAGAAGGGCTTGAGTGTGCTGTATGCCTATCAAAGTTTGAAGATGTAGAAATCCTCAGGATGCTGCCAAAGTGCAAGCATGCCTTTCATCTTGAATGCATTGATAATTGGCTTGAAAAGCACTCTAGCTGCCCTCTTTGCAGGAGCAAGGTCAATCCTGAGGATGAGACCATTTTTACATATTCAAATAGCATGAGATTCCTTGTTAACCAGTCAGAGTTGGGTGAGGAGTCATCCAACATAGAGCTCTTTGTTGAGAGAGAGGAAGAGCATAATGGGTCATCAAGGTTCAGTATTGGAAGCAGCTTTAGGAAAATTGAAAAGGGTTTTGAGGAAGAAGAATTGCCAATCCAAAAAGAAGCACAAGGTAGTGGTAGTGATGATGATGATGATGACAAGGTCTATCATAAGCAAAATCATAGGATTATAGTATCTGATGTTGTGTTTAAGAACCGTTGGAGCAACGTGAGTTCATCGGACCTCATGTTCTTGAAGTCAGAGGTGCTTGGTTCTATGTCTGGCAGAAGATTCAATTGGGAATCATATAATGACATCAAGGAGGAGATGGAGGTTGGTATACTTAACAAAATTAATTCAGCTTCAGACACTGGTCCTTCTTACACACAAGATTCTCGAGGAAATTCAAGTCATACATCAAAATATGCAAATCCAGCTGAGAAAAGATCAATGTCAGAAATCACTGCTGTCTCTAGATTTGAAGATTGGGGCATGAAAGGCAGAAGGGTCTTCAGAGAATCCTCTTTGCTGGAGAACAATATCAAAGAAGAAAGAGCAAGGCAGCTTTGGCTGCCAATTGCCAGAAGAACAGTTCAATGGCTTGTCAATAGAGAAAGAAGGTCTCTGCAGTCTCAGATTAAACAACAGCCATTAGATATATAG 1230 0.4057 MNQLCFRLLILCAILSRFCCKAQTSEVPDPEDGIPNFQPSLAVVLGILCLMFLLTIIILMYAKFCQQRASVHEDLETHPTLISSRSRFSGIDKTVIESLPFFRFSSLRGSREGLECAVCLSKFEDVEILRMLPKCKHAFHLECIDNWLEKHSSCPLCRSKVNPEDETIFTYSNSMRFLVNQSELGEESSNIELFVEREEEHNGSSRFSIGSSFRKIEKGFEEEELPIQKEAQGSGSDDDDDDKVYHKQNHRIIVSDVVFKNRWSNVSSSDLMFLKSEVLGSMSGRRFNWESYNDIKEEMEVGILNKINSASDTGPSYTQDSRGNSSHTSKYANPAEKRSMSEITAVSRFEDWGMKGRRVFRESSLLENNIKEERARQLWLPIARRTVQWLVNRERRSLQSQIKQQPLDI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01643 409 MobiDBLite consensus disorder prediction 310 337 - -
Bach8g01643 409 MobiDBLite consensus disorder prediction 224 243 - -
Bach8g01643 409 SMART ring_2 116 157 IPR001841 -
Bach8g01643 409 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 26 395 - -
Bach8g01643 409 CDD RING-H2_EL5-like 115 158 - -
Bach8g01643 409 MobiDBLite consensus disorder prediction 310 335 - -
Bach8g01643 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 167 IPR013083 -
Bach8g01643 409 FunFam RING-H2 finger protein ATL43 91 165 - -
Bach8g01643 409 SUPERFAMILY RING/U-box 95 164 - -
Bach8g01643 409 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Bach8g01643 409 Pfam Ring finger domain 115 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01643 Bach-Chr8 11480784 11482013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01643 24 409 C3H Transcription Factor Family AT4G28890 46.313 1.39e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01643 K10664 - gmx:100803207 506.523