Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01638 ATGGCTGAGCTACCAAGCTCAGAGGCAGAGACAAGTAGTCCGAACTGCTTCCCGCAGTCTCCATCTTCTCCGTCATCATCTGGGTCTGGTTTATCTCACTCTTTGCCAAACACCATTTCAAAAACAGAACCGGAACTGGAAGAGAGGAAGGCCAAGCGAGCTAGAGATAGCAGAAAGCACCTGGTTTACAGAGGAGTCCGAATGCGGGCATGGGGCAAGTGGGTATCCGAAATCCGCGAGCCCCGCAAGAAGAGTCGGATCTGGCTAGGCACCTTCGCCTCGCCGGAGATGGCAGCTCGTGCCCATGACGTGGCCGCACTGAGTATTAAAGGCAACTCAGCCATCCTCAATTTCCCGGAGCTAGCGGGTTCTCTGCCCCGACCCGCTTCTAACTCGCCAAGGGATGTTCAAGCTGCCGCCGCAAAAGCCGCTGCAATAGAAATATTTAACCCGACAACGACGTCGTCTCCTTCTTCATCGTCGTCGTCGATGATTTCGCAGTCTTCGTCTTCCTCGTCATTGGCAATATCTTGCTCCGACGACCCGTCGACCCCAGAAGAACTTGGTGAGATTGTGGAGCTTCCGGCTCTCGGAACCAGTTTCGAATCGCCCGACCCGAGTAACGACTTCGTCTTCGTTGACCCGGTGGATGGGTGGTTCTATCCTCACCCATGGTATCACACCATCTACGATGACAAGGATTGTGGTGCCTACTTCCCTGCGGATCAGATATCTATGCAAGAGGCAGAGAGTTTGATTCTTCGTGGCTTTGAGGGTTCATTGTGGCAACACTAA 795 0.5358 MAELPSSEAETSSPNCFPQSPSSPSSSGSGLSHSLPNTISKTEPELEERKAKRARDSRKHLVYRGVRMRAWGKWVSEIREPRKKSRIWLGTFASPEMAARAHDVAALSIKGNSAILNFPELAGSLPRPASNSPRDVQAAAAKAAAIEIFNPTTTSSPSSSSSSMISQSSSSSSLAISCSDDPSTPEELGEIVELPALGTSFESPDPSNDFVFVDPVDGWFYPHPWYHTIYDDKDCGAYFPADQISMQEAESLILRGFEGSLWQH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01638 264 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Bach8g01638 264 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Bach8g01638 264 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700|GO:0006355
Bach8g01638 264 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bach8g01638 264 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Bach8g01638 264 FunFam Ethylene-responsive transcription factor 2 61 120 - -
Bach8g01638 264 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Bach8g01638 264 Pfam AP2 domain 62 111 IPR001471 GO:0003700|GO:0006355
Bach8g01638 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 40 200 - -
Bach8g01638 264 MobiDBLite consensus disorder prediction 1 57 - -
Bach8g01638 264 MobiDBLite consensus disorder prediction 1 41 - -
Bach8g01638 264 CDD AP2 63 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01638 Bach-Chr8 11446373 11447167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01638 41 236 AP2-EREBP Transcription Factor Family AT5G11590 62.626 1.42e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach8g01638 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01638 K09286 - qsa:O6P43_003984 316.62