Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01628 ATGGATTTGGAAGCCTTCGACCTCGACGATGCTCTCGCCGTTGCCGAGGAATCACGCCGTCGATTCGCCGCATCCAATTCCTTTGTCTCAAACTTGCCGGCGGCTCCTGTTCATGACAAGGACGATGGAATTTGCTCGGTTTGTATGGAAGGCTTTGACCGAAACCATTCCACTGATTCTCAGGGAAGCAAACGAATGCCCTGCGGACACGTGTACCACGCAACCTGCATCATCGCCTGGCTCTCCCACTGCAATTCTTGCCCTCTATGCCGATCCGAAATCTCCGTCCGTCCAATCTAA 300 0.5367 MDLEAFDLDDALAVAEESRRRFAASNSFVSNLPAAPVHDKDDGICSVCMEGFDRNHSTDSQGSKRMPCGHVYHATCIIAWLSHCNSCPLCRSEISVRPI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01628 99 SMART ring_2 45 90 IPR001841 -
Bach8g01628 99 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 96 IPR013083 -
Bach8g01628 99 Pfam Ring finger domain 45 91 IPR001841 -
Bach8g01628 99 SUPERFAMILY RING/U-box 36 96 - -
Bach8g01628 99 ProSiteProfiles Zinc finger RING-type profile. 45 91 IPR001841 -
Bach8g01628 99 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 23 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01628 Bach-Chr8 11381779 11382078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01628 1 94 C3H Transcription Factor Family AT5G01980 44.000 6.49e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01628 - K22378 qsa:O6P43_003971 123.25