Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01615 ATGTCAAATTTCCATTACATTTCTTTTGTGCTTCTTGTTCTTCTTCTTCTTCTGCAGAATCCCAATACAGCACTATGCCACACCAAGGGAATTAGACCGAGGCGTTCTCCAGGGAATGGGTTAACGTTTAACATGACCCGGGTCCAAGAGTCTGAGGAGCAATTCATGCAATGGGTCAAGTTTGTTGGAAGCCTCAAGCATTCTGTTTTCAAGGCAGCAAAAAATAAGCTTTTTCCCTCTTACACTCTGCACGTTGCCAAGAATAAGGCGGCCGGAGATTTTACAACAATTCAAGAAGCCATTGATTCTCTCCCATTCATCAATCTTGTGAGAGTGGTCATCAAGGTTCATGCAGGGGTTTACACGGAGAAGGTTAATATACCTCAAATGAAAGGCTTCATAACCATAGAAGGAGCAGGGGCAGATAATACAATTATTCAATGGGGAGACACTGCTCAAACACGTGGGCCAAAAGGGCAGCCACTGGGAACCTACGGTTCTGCAACCTTTGGTGTAAATTCACCTTATTTCATTGCAAAGAACATCACTTTCAAAAACACAACCCCTGTCCCTGCACCGGGAGCAGTTGGAAAGCAAGCGGTGGCACTTAGAATTTCTGCAGATAATGCAGCATTCTATGGCTGTAAATTCTTAGGAGCACAGGACACGCTTTATGATCATCTGGGTCGGCATTATTATAAGGATTGTTACATTGAAGGCTCGGTTGATTTCATATTTGGAAACGCTCTCTCTCTGTTTGAGGGATGTCACGTGCATGCGGTAGCGCAGAACATAGGGGCCGTAACAGCGCAAGGAAGGAGTAGTCTATTAGAGGACACGGGGTTTTCATTTGTGAACTGTAAGGTCACGGGCTCAGGGGCACTATACCTTGGGAGGGCTTGGGGTCCCTTTTCTCGGGTCGTCTTTGCTTATACTTACATGGACAATATTATCATTCCCAAAGGCTGGTACAATTGGGGTGACCCTAATCGTGAGATGACTGTATTCTATGGGCAATACAAATGTACAGGACTAGGGGCTAGCTTTGCAGGAAGAGTATCATGGTCAAGAGAGCTCACTGATGAGGAGGCTAAGCCTTTTATCTCCCTTAGCTTTATTGATGGCTCGGAATGGATCAAATTATAA 1146 0.4494 MSNFHYISFVLLVLLLLLQNPNTALCHTKGIRPRRSPGNGLTFNMTRVQESEEQFMQWVKFVGSLKHSVFKAAKNKLFPSYTLHVAKNKAAGDFTTIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPQMKGFITIEGAGADNTIIQWGDTAQTRGPKGQPLGTYGSATFGVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRISADNAAFYGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAVAQNIGAVTAQGRSSLLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGLGASFAGRVSWSRELTDEEAKPFISLSFIDGSEWIKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01615 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
Bach8g01615 381 Gene3D - 79 381 IPR012334 -
Bach8g01615 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 72 380 - -
Bach8g01615 381 FunFam Pectinesterase 79 381 - -
Bach8g01615 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Bach8g01615 381 Pfam Pectinesterase 85 375 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01615 Bach-Chr8 11278867 11281780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01615 94 379 Carbohydrate Esterase AT5G47500 50.523 3.01e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01615 K01051 - gmx:100793314 670.618