Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01607 ATGGGAAAGAGCTGGATTCTGGGTTTTCTCCTCCTCCTCCACCATTTGACTGCAGCAGTATCTGCCATTGGTGTCGGCGGCGGTGTTGGAGTTGGAATTGGTGTTGGTGTTGGCAATGGTGGTGGGAACGGCGGTACGGTATGGATTGGTGGAGGCATCAACAGCCCAGAGCCACCGGGATCTCCAGTGCCAGGGCTGGACAGAGCTTACACGGCTCTGCAGGCATGGAAATCTGCAATTACTGATGACCCATTAAGGATTTTAGATAATTGGAATGGTTCTAATGTGTGTTCTTACAAAGGAGTGTTCTGTGCAGATGCTCAAAATGCAAATGGTCCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTCCAAGGAACTCTTGTAAAGGAGCTATCTTTACTCACTGAATTGTCTCTTCTTCACCTCAACAGTAATAGATTTTCTGGCACGGTTCCTGATACATTCAAAGACCTCTCGTCTCTGGAAGAGCTGGACCTAAGCAACAACCAGTTTTCAGGTTCTTTTCCCATGGTTACTATTTACATGCCAAGTCTCATTTACTTAGACCTCAGATTCAACTCTTTCTCAGGGCCACTCCCTGAAGACCTTTTCAATAAGAAACTGGATGCAATTTTCCTCAACAACAACCAGTTTGCAGGTGAAATTCCCCAAAATCTGGGTAATTCCCCAGCTTCTGTCATCAATTTAGCCAACAACAAACTCAGTGGAAACATCCCTTTTAGTTTTGGCTTCATGGGTTCTAAATTAAAGGAGATCCTCTTTCTGAATAACCAGTTAACAGGCTGCGTTCCTGAGGGTGTAGGCATCTTCACGGAGATGCAAGTTCTGGATGTTAGCTCAAATTCACTCATGGGTCATATACCTGACACATTATCTTGTCTGCAAGATATAGAAGTTCTCAACTTGGCTCACAACAAGCTTTCTGGGGAATTACCAGATGTTCTCTGCTCTCTAAGAAGCCTGATGAATCTAAGTGTTGAGTACAATTTCTTTTCTAAGTTCAGCCAAGAGTGCTCAAGGCTTCCCTTAAGAAATGTGGGTTTTGATTTCTCACTTAACTGCATTCCGGGGAGGGACATGCAGAGACCTCAACCAGAATGTTCTGTAATCCCAGGTGGTAGCTTGAGTTGTCTGAGAATTCCGACACCAAAGCCTCTTGTTTGTGGTTCACTGGGTGTGAGCAGTAGCACCAATAGGAAAATTAATCCCAGTTCGTCTTCTCCTTGA 1254 0.4458 MGKSWILGFLLLLHHLTAAVSAIGVGGGVGVGIGVGVGNGGGNGGTVWIGGGINSPEPPGSPVPGLDRAYTALQAWKSAITDDPLRILDNWNGSNVCSYKGVFCADAQNANGPFVAGIDLNHANLQGTLVKELSLLTELSLLHLNSNRFSGTVPDTFKDLSSLEELDLSNNQFSGSFPMVTIYMPSLIYLDLRFNSFSGPLPEDLFNKKLDAIFLNNNQFAGEIPQNLGNSPASVINLANNKLSGNIPFSFGFMGSKLKEILFLNNQLTGCVPEGVGIFTEMQVLDVSSNSLMGHIPDTLSCLQDIEVLNLAHNKLSGELPDVLCSLRSLMNLSVEYNFFSKFSQECSRLPLRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLGVSSSTNRKINPSSSSP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01607 417 FunFam Leucine-rich repeat receptor protein kinase EMS1 251 346 - -
Bach8g01607 417 Gene3D Ribonuclease Inhibitor 67 232 IPR032675 -
Bach8g01607 417 Gene3D Ribonuclease Inhibitor 233 355 IPR032675 -
Bach8g01607 417 FunFam Leucine-rich repeat extensin-like protein 1 70 230 - -
Bach8g01607 417 Pfam Leucine rich repeat 138 196 IPR001611 GO:0005515
Bach8g01607 417 PRINTS Leucine-rich repeat signature 303 316 - -
Bach8g01607 417 PRINTS Leucine-rich repeat signature 163 176 - -
Bach8g01607 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 393 - -
Bach8g01607 417 Pfam Leucine rich repeat N-terminal domain 69 104 IPR013210 -
Bach8g01607 417 SUPERFAMILY L domain-like 69 351 - -
Bach8g01607 417 SMART LRR_typ_2 136 159 IPR003591 -
Bach8g01607 417 SMART LRR_typ_2 184 208 IPR003591 -
Bach8g01607 417 SMART LRR_typ_2 160 179 IPR003591 -
Bach8g01607 417 SMART LRR_typ_2 303 327 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01607 Bach-Chr8 11221027 11222280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01607 64 388 Leucine-rich Repeat extension Gene Families AT3G24480 50.602 8.25e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01607 - - qsu:112008913 588.571