Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01600 ATGATGCTCGGAGAACCTCATCGTCCGAATCCAACGGTCCACGTTCCTCCGTGGTCGGTGCTTGATGATCAAACGCAAGAGATGTACTCTCCTTACCCTGTCAGCGGTGTCTCTGTCAACTCCGACGGTAATGCCAACGGTGGTGATTATTCTCCCTATTACCTGCAAGAAGCACTGACTTCGCTTCAGCGTTACCTACCATCGAACGACGCGGACATAGACTCGGACTCTGAGATTATGGGTCGTGAGTCTGATGCTCCGGTGGATGCCTACTCCTGCGACCATTTCCGGATGTTCGAGTTTAAAGTGAGGAGGTGCGCACGTGGCAGGTCACATGACTGGACCGAGTGCCCTTTTGCTCATCCCTGCGAAAAGGCTCGCCGTAGGGACCCGAGGAAGTATCACTATTCAGGTACTGCATGCCCTGATTTTCGCAAGGGAAGTTGCAAGAAGGGGGATGCATGTGAGTTTGCCCACGGAGTGTTCGAGTGTTGGCTTCACCCGGCTCGTTATCGAACACAGCCATGCAAGGATGGGACTAGTTGCCGGAGAAGGGTGTGTTTCTTTGCTCACACGCCGGAGCAACTGCGAGTGCTGCCTCAGCAGAGTCCACGGAGTGTTAACTCGGCAGACTCTTATGATGGGTCTCCTTTAAGGCAGGCGATTGAGTCTTCTTGTGTGAAAACGCTGTCTTTCTTGTCCTCTCCACGCTCGATTTCTCCACCGTCGTCGCCTCCGTTGGAGTCGCCTCCTATGTCGCCGATGACACAGTCTCTGAGCCGCTCTCTTGGTTCCAGCTCCATCAATGAGATGGTGGCTTCTCTGCGTAATTTACATGTTGGCAAGGTCAAATCATTACCTACCTCCTGGAATGTTCAACTGGGTTCGCCATGTTTCGGGTCTCCCAGAGGATCTGTGCTCCGTCCAGGGTTCTGCAGCCTCCCCTCCACCCCTACTCAGGTGCCTGCTCGTTCTGGTATCAGCTGCTGCGACACATGGGAGGAGAGTTTTGAGGAGGAGCCTGCGATGGAAAGGGTGGAGTCTGGAAGGGACATTCGCGCAAAGATGTTTCAGAAGTTGAGCAAGGAGAACACTCTGGATCGATCCGACCCGACTTCATCAAGTGGCACTCCAGATGTTGGGTGGGTCTCAGAGCTGTTGAAATGA 1167 0.5381 MMLGEPHRPNPTVHVPPWSVLDDQTQEMYSPYPVSGVSVNSDGNANGGDYSPYYLQEALTSLQRYLPSNDADIDSDSEIMGRESDAPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPFAHPCEKARRRDPRKYHYSGTACPDFRKGSCKKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSVNSADSYDGSPLRQAIESSCVKTLSFLSSPRSISPPSSPPLESPPMSPMTQSLSRSLGSSSINEMVASLRNLHVGKVKSLPTSWNVQLGSPCFGSPRGSVLRPGFCSLPSTPTQVPARSGISCCDTWEESFEEEPAMERVESGRDIRAKMFQKLSKENTLDRSDPTSSSGTPDVGWVSELLK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01600 388 Gene3D - 136 199 - -
Bach8g01600 388 FunFam Zinc finger CCCH domain-containing protein 66 93 161 - -
Bach8g01600 388 PANTHER UNKEMPT FAMILY MEMBER 46 388 IPR045234 -
Bach8g01600 388 ProSiteProfiles Zinc finger C3H1-type profile. 136 162 IPR000571 GO:0046872
Bach8g01600 388 MobiDBLite consensus disorder prediction 233 261 - -
Bach8g01600 388 MobiDBLite consensus disorder prediction 361 388 - -
Bach8g01600 388 SMART c3hfinal6 170 193 IPR000571 GO:0046872
Bach8g01600 388 SMART c3hfinal6 135 161 IPR000571 GO:0046872
Bach8g01600 388 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 140 160 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01600 Bach-Chr8 11158152 11159318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01600 85 199 C2H2 Transcription Factor Family AT5G12850 70.435 4.16e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach8g01600 zf-CCCH 2.4e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01600 - - qsa:O6P43_003933 659.062