Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01577 ATGTATCGTAAGTGGTTGTTTGACCATACCCATGTGAAGATATCATGGATTCATCATCAAATCCAGCAGAAAGATGGGTACTTGAGCTACCCACCTCCGGTTTTGCCTTCACCTTCACCCCCTTACTCTGGTGCTTTCCACAAAGAATCAGTTTCTGCGTCTTCATCATCTGGTACTAGGATTAGTCCTGCAGTTCTTTTCATTATAGTGATCCTAGCTGTATTGTTTTTCATTTCTGGTCTGCTCCATCTACTTGTTAGATTTCTCATAAAGCACCCATCATCCTCAGCATCTACACAATCTAATAGACACCATGAAGTTTCTACCTCTGATGCTCTTCAAAGACAACTTCAACAACTTTTTCATCTGCATGACTCGGGTCTAGATCAAGCATTCATTGATGCACTCCCTGTTTTCCAGTATAAAGAGATAGTGGGTCCGGAAGAGCCATTTGACTGTGCTGTTTGTCTCTGTGAATTTTCTGAGAAGGACAAGCTCAGATTGCTCCCTCAGTGCAGCCATGCTTTTCATATAAGTTGTATAGACACTTGGCTCCTGTCTAATTCAACATGCCCGCTTTGTAGGGGGACCCTCTTTACTCCAGGCTTTTCAGTGGAAAACCCAATGTTTGATTTTGATGATTTACAAGAAGAAGATGGGTGCCCCTGTAATATTGAAAATCGATTCACTTCCAGACAGAAAACTGTTGAAATTGAAGAAACTGTAGAGAAAGGGGTTTTCCCAGTGAGACTTGGTAAGTTTAGAAGGCTGAATCTGGAATCAGGAGAGGATGCAGGAGGAGAGACTAGTAGCAGTAATTTAGATGCAAGAAGATGTTACTCAATGGGATCTTATCAATATGTGCTTGGCAACTCTGACCTTCGAATTTCCTTGACCCGTGATGGTGAGCTCACCAAAGGAAGAGAACACACTGAGAAGCTTTCAATTGAAGGAGATATGGAAACAAAGAGGATTAGCAGCACTTGCCATGGATGGGGAAAAGAGATGAAACATGAAAGTTTCATGCACTGA 1032 0.4205 MYRKWLFDHTHVKISWIHHQIQQKDGYLSYPPPVLPSPSPPYSGAFHKESVSASSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASTQSNRHHEVSTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGPEEPFDCAVCLCEFSEKDKLRLLPQCSHAFHISCIDTWLLSNSTCPLCRGTLFTPGFSVENPMFDFDDLQEEDGCPCNIENRFTSRQKTVEIEETVEKGVFPVRLGKFRRLNLESGEDAGGETSSSNLDARRCYSMGSYQYVLGNSDLRISLTRDGELTKGREHTEKLSIEGDMETKRISSTCHGWGKEMKHESFMH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01577 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 200 IPR013083 -
Bach8g01577 343 ProSiteProfiles Zinc finger RING-type profile. 153 195 IPR001841 -
Bach8g01577 343 SUPERFAMILY RING/U-box 132 201 - -
Bach8g01577 343 Pfam Ring finger domain 152 195 IPR001841 -
Bach8g01577 343 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 56 299 - -
Bach8g01577 343 FunFam RING-H2 finger protein ATL46 115 200 - -
Bach8g01577 343 CDD RING-H2_EL5-like 152 195 - -
Bach8g01577 343 SMART ring_2 153 194 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01577 Bach-Chr8 10962422 10964078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01577 49 289 C3H Transcription Factor Family AT2G18650 43.542 3.33e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01577 - - qsa:O6P43_004596 502.671