Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01569 ATGGAGTCCAGCCATCTTTTCTTCGACCCTTCCGCTTGCCATGGGAACATGCTCTTCCTCGGGAATGGTGATTCCGTTTTTGGAGCAGGAAGATCGGTGATGAGCATGGAGGAAACCTCAAAGAGGAGACTTTTCTTCAGCTCACCAGATGAACTGTTCGACGAGGAATATTACGACGAGCAGTTGCCGGAGAAGAAGCGCCGCCTCACTCCTGAGCAGGTCCATCTGTTGGAGAAAAGCTTTGAGGCAGAGAACAAACTGGAGCCAGAGAGGAAGACCCAGTTGGCCAAGAAGCTGGGATTGCAGCCAAGGCAGGTGGCTGTGTGGTTTCAGAACCGCCGGGCTCGGTGGAAGACCAAGCAACTTGAAAGAGATTATGATATTCTCAAGTCTTCTTATGATTCCCTTCTATCAAAGTATGAATCTGTTGTGAAAGAGAATGAAAAGCTCAAAGTTGAGGCAGTATCCTTAAATGAGAAGGTTCAAGCTGAAGACGTGTCCGGAACACCAGCATCAGTCGAAAAAACCGAACCAATTGCTGCGGATATGGTCCAAATTCCGGCCCTACCATCCTCCACTTCTGGGAGTGGTGGAAGTGCAGTGGTGGATGAAGATAGTCGACAGCTGGTTGTGGACAGCGTTGATTCATACTTTGCAGCTGACAATTATGCTGATGCTGGATGCCAGCTAGACAGAGGCGATAGAGTTCAGTCAGAAGAAGATGATGGCAGTGATGATGGCCGGAGTTACTTCTCGGACGTTTTTGTAACTGAACCCCATTACCATGAGGACGGCGAGACGTTGGGTTTGTGGGTCTGGTCTTAA 825 0.4921 MESSHLFFDPSACHGNMLFLGNGDSVFGAGRSVMSMEETSKRRLFFSSPDELFDEEYYDEQLPEKKRRLTPEQVHLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDILKSSYDSLLSKYESVVKENEKLKVEAVSLNEKVQAEDVSGTPASVEKTEPIAADMVQIPALPSSTSGSGGSAVVDEDSRQLVVDSVDSYFAADNYADAGCQLDRGDRVQSEEDDGSDDGRSYFSDVFVTEPHYHEDGETLGLWVWS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01569 274 SMART HOX_1 63 124 IPR001356 GO:0003677
Bach8g01569 274 SUPERFAMILY Homeodomain-like 65 131 IPR009057 -
Bach8g01569 274 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 54 199 IPR045224 GO:0003700
Bach8g01569 274 Pfam Homeodomain 65 118 IPR001356 GO:0003677
Bach8g01569 274 PRINTS Lambda-repressor HTH signature 91 100 IPR000047 GO:0003677
Bach8g01569 274 PRINTS Lambda-repressor HTH signature 100 116 IPR000047 GO:0003677
Bach8g01569 274 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Bach8g01569 274 MobiDBLite consensus disorder prediction 232 248 - -
Bach8g01569 274 MobiDBLite consensus disorder prediction 229 251 - -
Bach8g01569 274 CDD homeodomain 65 121 IPR001356 GO:0003677
Bach8g01569 274 FunFam Homeobox-leucine zipper protein HAT5 58 122 - -
Bach8g01569 274 Coils Coil 133 160 - -
Bach8g01569 274 Gene3D - 59 126 - -
Bach8g01569 274 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Bach8g01569 274 Pfam Homeobox associated leucine zipper 120 162 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01569 Bach-Chr8 10879326 10881434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01569 1 273 Homeobox Transcription Factor Family AT3G01470 57.143 1.37e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach8g01569 Homeodomain 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01569 K09338 - cave:132183258 358.607