Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01546 ATGGACAAAAAACAGTGCAACTCATCTCAAGATCCAGAAGTGAGAAAGGGGCCATGGACCATGGAAGAAGACTTGATCTTGATCAACTACATTGCTAATCACGGCGAAGGCGTCTGGAACTCATTAGCCAAAGCTGCAGGTCTTAAACGCACCGGCAAGAGTTGCCGTCTGCGGTGGCTTAACTATCTTCGCCCTGATGTCAGGAGAGGAAATATTACACCAGAAGAACAGCTCTTGATCATGGAACTTCATGCAAAGTGGGGAAACAGGTGGTCGAAAATCGCAAAGCATCTACCGGGAAGGACTGACAACGAAATAAAGAACTACTGGAGGACTAGAATTCAAAAGCACATCAAGCAAGCTGAGAGCTTTCAGCAGCAGATGAGTTCAGAAGTAAATGATCAAGCAGCAAGCACTAGTCAAATCTCCACCATGGCTCATCACGAGCCCATGGAGACCTACTCACCACCCATATACCAGCTGGGAACCCTGGAGCCCTTTCCAACTCACCAGTTCCCCACTGTTCCTGATCATTCAAGCTGTGCCAATGGCAGCAACAGTACCAGCAACTACTGGACCATGGAGGATATCTGGTCCATGCAGTTACTTAACGGAGATTAA 621 0.4767 MDKKQCNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAESFQQQMSSEVNDQAASTSQISTMAHHEPMETYSPPIYQLGTLEPFPTHQFPTVPDHSSCANGSNSTSNYWTMEDIWSMQLLNGD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01546 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bach8g01546 206 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 11 145 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach8g01546 206 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bach8g01546 206 CDD SANT 73 112 IPR001005 -
Bach8g01546 206 Gene3D - 73 143 - -
Bach8g01546 206 SMART sant 68 116 IPR001005 -
Bach8g01546 206 SMART sant 15 65 IPR001005 -
Bach8g01546 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bach8g01546 206 CDD SANT 18 63 IPR001005 -
Bach8g01546 206 FunFam Myb-related protein 305 73 142 - -
Bach8g01546 206 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Bach8g01546 206 Gene3D - 16 68 - -
Bach8g01546 206 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bach8g01546 206 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bach8g01546 206 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bach8g01546 206 FunFam Myb transcription factor 16 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01546 Bach-Chr8 10712894 10715713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01546 10 206 MYB Transcription Factor Family AT3G01530 57.500 1.07e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g01546 Myb_DNA-binding 6.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01546 K09422 - gmx:778046 363.614