Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01528 ATGGACCATTCCAATCCCCAGTCGCTCTTCCGCCATATCAAATCCAGAGAGCTAAATGGGTTCAGAGTTCGGAAGCGGCCTTACATAGATGCGGTTGGATCCGATTTCAGTGAAATCGGAGCAATAGCTGTAGACCATGATGGTAGCGAGACTCCGCCGTTGGCACTCTCGTTCTGTAAGACCGCAAAAAATTCCCACATCGTTGCTTTGTCCGATGAGGATGGGTACATGAGCTTGTTTGATACTCGCCGCAAGTTTCCCTCTTCCGCGTCCTATCAAGAAAATGCAGACAAATCAAAGATTTGCGATTGGGTTGCTCATCATAATGCCGTTTTTGATGTATGTTGGATTAAGGGAGATACGCAGATTCTCACAGCTTCGGGTGATCAAACAATGAAGCTATGGGATGTTGAGACTAAGCGATGTAAAGGAATATTGATGGGGCACACGGGAAGTGTGAAATCTATGTCTTCTCATCCAAACGATACTGATATTATCGTCTCTGGTTCAAGAGATGGATCCTTTTGTCTCTGGGATATGAGATGCAACTCCACCTCTAAGAGTAGGCGCGGGGAACTTTGCATAGGTTCAACGGCTGTGGTCAAAGGCGCACATCTTTCATCTCAAGCAAAACGAGTTAGGAGGGGCAAGACTGCTTCTATGAGCATTACCTCAGTTCTTTATCTCAAGGATCAGATTTCCATAGCTACTGCCGGAGCTGCTGATAGTATTGTGAAGTTCTGGGATACCAGAAACCTGAAAAGTTTAGTCACGCAGGCATGCCCTCGTCCCCAGACAATCGAAAAGGAAAGATTACATGGTATATCTAGCTTGTCCCAAGATCACAGTGGAGTATTTGTTTCAGCCTCCTGCATGGATAACAGAGTATATCTGTATAATATACTTCAGCTTGAAAAGGGGCCTCTAAAATCTTTTTCTGGATGCCGAATAGAATCATTTTTTGTAAAGTCTGCAATTAGCCCTGATGCAACGCACATTGTCAGTGGTTCTAGTGATGGAAATGCATATATTTGGCAGGTTAACAAGCCTCTGGAGGATCCTATTGCTTTAAAAGGTCACGATGGAGAAGTGACAGCAGTTGACTGGTGCCCCTCGGAGGTTGGCAGATTAGCAACTTCTTCTGATGATTTCACAGTTCGGATTTGGGATAAGGGCAGTTACTTCTCGAACACAATACCTCCGTCTTCAATTCGGAGGAGAGTAATGGCAATGCCTACAACAGAATGCAGAAAGCTTTTAATGAATGATGAAGCAACGAGTCCGAAACCACATCCTGATAGTGCTTTGCTTTCTGATGAAGCACTGCACCAAATTAATCCAGCCACTCCAATCACACCACCTAAAGTGCATACACCCGAATGCCATAAGAAACAGTTTTCATCTGGTTCTGATTTATCTGAATCGTCTGAAAAAACTCCTGAATCCACTTTGAAAAGCCCCTCTTCTGTTTTGAACCCTCCATCTTCTCTAAAACGGACCATCAGAGATTACTTTCTAGCTGTTTCATGA 1530 0.4418 MDHSNPQSLFRHIKSRELNGFRVRKRPYIDAVGSDFSEIGAIAVDHDGSETPPLALSFCKTAKNSHIVALSDEDGYMSLFDTRRKFPSSASYQENADKSKICDWVAHHNAVFDVCWIKGDTQILTASGDQTMKLWDVETKRCKGILMGHTGSVKSMSSHPNDTDIIVSGSRDGSFCLWDMRCNSTSKSRRGELCIGSTAVVKGAHLSSQAKRVRRGKTASMSITSVLYLKDQISIATAGAADSIVKFWDTRNLKSLVTQACPRPQTIEKERLHGISSLSQDHSGVFVSASCMDNRVYLYNILQLEKGPLKSFSGCRIESFFVKSAISPDATHIVSGSSDGNAYIWQVNKPLEDPIALKGHDGEVTAVDWCPSEVGRLATSSDDFTVRIWDKGSYFSNTIPPSSIRRRVMAMPTTECRKLLMNDEATSPKPHPDSALLSDEALHQINPATPITPPKVHTPECHKKQFSSGSDLSESSEKTPESTLKSPSSVLNPPSSLKRTIRDYFLAVS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01528 509 SMART WD40_4 207 249 IPR001680 GO:0005515
Bach8g01528 509 SMART WD40_4 35 81 IPR001680 GO:0005515
Bach8g01528 509 SMART WD40_4 305 346 IPR001680 GO:0005515
Bach8g01528 509 SMART WD40_4 265 300 IPR001680 GO:0005515
Bach8g01528 509 SMART WD40_4 139 179 IPR001680 GO:0005515
Bach8g01528 509 SMART WD40_4 97 136 IPR001680 GO:0005515
Bach8g01528 509 SMART WD40_4 350 390 IPR001680 GO:0005515
Bach8g01528 509 ProSitePatterns Trp-Asp (WD) repeats signature. 123 137 IPR019775 -
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 104 139 - -
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 357 390 - -
Bach8g01528 509 MobiDBLite consensus disorder prediction 465 495 - -
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 348 IPR001680 GO:0005515
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 146 188 IPR001680 GO:0005515
Bach8g01528 509 Pfam WD domain, G-beta repeat 106 136 IPR001680 GO:0005515
Bach8g01528 509 Pfam WD domain, G-beta repeat 141 179 IPR001680 GO:0005515
Bach8g01528 509 Pfam WD domain, G-beta repeat 357 390 IPR001680 GO:0005515
Bach8g01528 509 Pfam WD domain, G-beta repeat 309 345 IPR001680 GO:0005515
Bach8g01528 509 SUPERFAMILY WD40 repeat-like 58 393 IPR036322 GO:0005515
Bach8g01528 509 Gene3D - 196 411 IPR015943 GO:0005515
Bach8g01528 509 Gene3D - 34 190 IPR015943 GO:0005515
Bach8g01528 509 PRINTS G protein beta WD-40 repeat signature 377 391 IPR020472 -
Bach8g01528 509 PRINTS G protein beta WD-40 repeat signature 123 137 IPR020472 -
Bach8g01528 509 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 104 145 IPR001680 GO:0005515
Bach8g01528 509 PANTHER LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN 3 506 - -
Bach8g01528 509 MobiDBLite consensus disorder prediction 446 495 - -
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 357 390 IPR001680 GO:0005515
Bach8g01528 509 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 146 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01528 Bach-Chr8 10574928 10578478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01528 119 345 U-box Gene Family AT1G04510 25.600 1.26e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01528 K11790 - jre:109007234 745.732