LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g01525	ATGGACTCACTTGTTAATGGAGTTGAGTCTTTACCAGAGGATCTGAACTCAGTTTCTGCTGTTGCTCAAGGTCTTCCTTCAACGTCTGAGACTCCTCAGCCTTCCCGGCCTCCCCTCAGATCATCGAGAAATCATGTGGCTTCTTCCACATCCTATTTGACAGGTCATCATAACTATGGCATGAAGACTATCCACCATCAAAACGGGTATGCAATTAATCAAAAGCTATCTTATCATGAGGCCAACAATGTACATCATGAAGAATTATCAAATATGACAAGGCACTTTTACAATCTTAATGAAAAATCAGGCTATTTGAACCTGGGTGGTGGTGGTGTTCTCAATAAAACAGGAGAAAGTTGTTCAGGGAAGAATGTCTCAACAATGGATACAAATGGCATGTTGGGATCTGGTTGCTCTGTTATAGACTCTTCTAAGGGAGGTGTTGACCAAACAAAGAGTTGCTGTCAGTCAGAGGTTACTTTTTGTCCAAGTCCTCAGAACAGCTTCTATTCTGCTACTATCTATTCTGAAGCCAAACAAAGTTTCACCAATACTGAAGTCAGTGAATGTGTTAGTGTTGATAAGTCAGGTGAAAGTTGTGAAGTTACTCAGTCCTGTGATTTGAATGAGAGCAGGAAGACAAGCAATTGTAGAGGGAGTACTGGAAGTGATGTTAGTGATGAGAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCCCACAAGGCAAATGATATTAGATGGGAAGCAATTCAAGCCATTCGAGCTCGTGATGGGATGTTAGAGATGAGACATTTCAGATTGCTGAAGAAATTGGGGTGTGGAGACATAGGAAGTGTTTATCTAGCAGAATTGTCTGGCAAGAGGACTTGTTTTGCCATGAAAGTTATGGATAAAACAGATCTGGGAAGTCGCAAGAAGCTTCCAAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCTTTTCTACCAACATTATATACACACTTTGAGACAGAGACATTCTCGTGCTTGGTTATGGAGTTCTGCCCAGGTGGAGACTTGCATGCACTCCGGCAAAGACAGCCTGGGAAATATTTTTCAGAGCAGGCTGCCAGGTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATCATCTACAGAGATCTTAAGCCTGAGAATGTGTTGGTCAGAGAAGATGGGCATATAATGCTTTCCGATTTTGACCTCTCTCTGAGGTGCGCTGTTAGCCCGACTCTTGTAAAGTCCACAAACTCAAGCTTGGAGACTAAAAGCTCAGGTTATTGCATTCAGCCTGCTTGCATTGAACCAACTTGTGTAATGCAGCCAGATTGCATCCAACCTTCATGTTTCACACCACGCTTTCTCTCTGGAAAACCCAAGAAAGAAAAGAAGTATAAACCAAAGAATGAAATGCATCAGGAGGTGACCCCTCTTCCTGAGCTCATTGCAGAACCCACAAATGCTCGATCTATGTCCTTTGTTGGTACACATGAGTACTTGGCACCTGAAATTATTAAAGGTGAAGGGCACGGCAGTGCTGTAGATTGGTGGACATTCGGGATATTCTTGTATGAGCTTTTGTTTGGTAGGACACCATTTAAGGGTTCAGCGAATCGAGCAACTCTATTTAATGTGGTTGGCCAGCCCTTAAGATTTCCAGAATCCCATACTGTCAGCTTTGCTGCCAGGGACTTGATTAGGGGTTTGCTTGTGAAGGAGCCCCAGCATCGTCTTGCCTATAGACGTGGAGCTACAGAAATTAAACAGCATCCATTCTTTCAGAATATTAATTGGGCACTGATCCGTTGTGCAAGTCCTCCAGAGGTGCCTAGACAAGCCGTGAGAGCACTGGCAGCTGAAAATGTGCCTGGTGTGAAGCCTTCTGGTAACTATTTAGATATTGAATTCTTTTGATCCTAACGTCTATTTACTCCTTTGAACCAGTTTCCCATCTCCTCATCTCTGTGTTGTGCATGTCCATGGTTCTTTCTATTGCACAAAAGGATGCAATTCTTTCAACTACATTGATCAGAACTTGTAACTGCCCATCATAAACTGCTGTAACAAACTCCAAATGCATATTAAATTGAGGAACAAAGTTGGACTCTGACTCTGATTTAAAAATTCTGTTTAATTTGAAATTGATGGTAAAGCTCTGAGAGTTTGTGATGGGCAAAAAAGGCTGCTGAAGAGATGAAGCCTGTGAACTTATCTTTCACTTTTTTTTTCTGTATGTCACTGCTTAGCACCAGCTGCAATTCAAGTCTAACCTGGGCAGAAGAAAAATGATTTAGGAAAGAGAAAAAAAGGACATATTATGGGCTCTATTT	2363	0.4219	MDSLVNGVESLPEDLNSVSAVAQGLPSTSETPQPSRPPLRSSRNHVASSTSYLTGHHNYGMKTIHHQNGYAINQKLSYHEANNVHHEELSNMTRHFYNLNEKSGYLNLGGGGVLNKTGESCSGKNVSTMDTNGMLGSGCSVIDSSKGGVDQTKSCCQSEVTFCPSPQNSFYSATIYSEAKQSFTNTEVSECVSVDKSGESCEVTQSCDLNESRKTSNCRGSTGSDVSDESTSSLSSALYKPHKANDIRWEAIQAIRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGKRTCFAMKVMDKTDLGSRKKLPRAQTEREILQLLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEQAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSTNSSLETKSSGYCIQPACIEPTCVMQPDCIQPSCFTPRFLSGKPKKEKKYKPKNEMHQEVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESHTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCASPPEVPRQAVRALAAENVPGVKPSGNYLDIEFF	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g01525	648	MobiDBLite	consensus disorder prediction	212	232	-	-
	Bach8g01525	648	Gene3D	Phosphorylase Kinase; domain 1	265	350	-	-
	Bach8g01525	648	Gene3D	Transferase(Phosphotransferase) domain 1	498	622	-	-
	Bach8g01525	648	Pfam	Protein kinase domain	501	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach8g01525	648	Pfam	Protein kinase domain	268	421	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach8g01525	648	FunFam	serine/threonine-protein kinase D6PK-like	499	622	-	-
	Bach8g01525	648	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	388	400	IPR008271	GO:0004672\|GO:0006468
	Bach8g01525	648	MobiDBLite	consensus disorder prediction	22	54	-	-
	Bach8g01525	648	Gene3D	Transferase(Phosphotransferase) domain 1	351	419	-	-
	Bach8g01525	648	SUPERFAMILY	Protein kinase-like (PK-like)	244	624	IPR011009	-
	Bach8g01525	648	PANTHER	FLIPPASE KINASE 1-RELATED	101	626	-	-
	Bach8g01525	648	FunFam	serine/threonine-protein kinase D6PK-like	351	418	-	-
	Bach8g01525	648	ProSiteProfiles	Protein kinase domain profile.	267	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach8g01525	648	SMART	serkin_6	267	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach8g01525	648	CDD	STKc_phototropin_like	265	627	-	-
	Bach8g01525	648	FunFam	Serine/threonine-protein kinase D6PK-like	265	350	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g01525	Bach-Chr8	10545839	10549448	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g01525	176	648	AGC Kinase Gene Family	AT5G47750	68.699	0.0	679

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Bach8g01525		Pkinase	7.9e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g01525	K08286		-	gmx:100802402	956.051