Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01452 ATGCCGGAGGAGACAACATCTATCGACTATGTCATGGAGGCAGCTTCCGGGCCCCACTTCTCGGGGCTCCGTCTGGATGGCCTTCTTTCCTCTCCACCTTCTTCATCTTCTTCATCTCCTGCTCATCGTTTTTCTTCTGCTGCTGCTGCTGCTGCAGCGTCTGCTCTGGATTCGTCACTAGGCCCCGACTCTGCTCCCACACAGCCATTTGTTATCGGAGTTTCGGGAGGTACTGCATCAGGTAAGACCACAGTATGTGATATGATCATCCAACAGCTTCACGATCACCGCGTTGTGCTCGTCAATCAGGACTCATTCTATCGTGGTTTGACACCTGAAGAATTGCTGCGCGTGCACGAGTACAATTTTGATCATCCAGATGCTTTTGACACCGAACAGCTATTAGAATGCACACGACAACTCATTGCTGGCCACTCTGTCGAAGTCCCTGTTTATGACTTTAAGAAGCACCAGCGCTGTTCAGATAGTTTTCGACAGGTTAATGCTTCTGATGTCATCATATTGGAGGGAATTTTGGTTTTCCATGACCAACGTGTCCGTGATCTGATGAACATGAAAATTTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTGCCATCAAAGAAGTATGGTGATGTGATCATTCCACGAGGAGGTGATAATCATGTTGCTATTGATCTGATCGTGCAACATATCCGCACAAAACTTGGTCAACATGATCTATGCAAAATATATCCAAACGTGTATGTCATTCAGTCAACATTCCAGATAAGAGGAATGCATACATTAATTCGTGACCAAGACATATCAAAGCATGACTTCGTGTTTTATTCTGACCGACTTATCCGTCTGGTTGTTGAACATGGCCTTGGTCATTTGCCATTCACAGAAAAACAAGTAGTTACTCCGACAGGATCTGTCTATACTGGCGTTGACTTCTGCAAGAAGTTGTGCGGCGTTTCAATTGTTCGAAGTGGTGAGAGTATGGAAAATGCATTGCGTGCTTGTTGCAAAGGCATTAAAATTGGAAAAATCCTGATTCACCGAGATGGAGACAATGGAAAGCAGCTAATATATGAGAAGCTTCCCAAGGATATTTCAGAACGTCATGTCTTGCTTCTTGACCCCGTCCTTGCTACAGGTAATTCTGCGAACCAAGCAATTGAGCTACTCATCCAGAAAGGAGTTCCAGAATCTCACATCATTTTCCTGAATCTCATCTCTGCTCCCGAGGGAATCCATTGTGTGTGTAAAAGGTTTCCATCCTTGAAAATTGTCACATCTGAGATTGACGTTGCAATAAACGAAGAGTTCCGTGTTGTCCCCGGAATGGGCGAGTTTGGCGATCGCTACTTTGGAACTGACGATTGA 1473 0.4494 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSSSSPAHRFSSAAAAAAASALDSSLGPDSAPTQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEELLRVHEYNFDHPDAFDTEQLLECTRQLIAGHSVEVPVYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYGDVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDQDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVAINEEFRVVPGMGEFGDRYFGTDD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01452 490 PRINTS Uridine kinase signature 215 226 - -
Bach8g01452 490 PRINTS Uridine kinase signature 99 110 - -
Bach8g01452 490 PRINTS Uridine kinase signature 201 211 - -
Bach8g01452 490 PRINTS Uridine kinase signature 69 86 - -
Bach8g01452 490 PRINTS Uridine kinase signature 144 159 - -
Bach8g01452 490 PRINTS Uridine kinase signature 237 250 - -
Bach8g01452 490 Gene3D - 66 272 IPR027417 -
Bach8g01452 490 PANTHER URIDINE KINASE 62 399 - -
Bach8g01452 490 Gene3D - 273 488 IPR029057 -
Bach8g01452 490 FunFam Uridine kinase 66 272 - -
Bach8g01452 490 SUPERFAMILY PRTase-like 272 489 IPR029057 -
Bach8g01452 490 Pfam Phosphoribulokinase / Uridine kinase family 71 257 IPR006083 GO:0005524|GO:0016301
Bach8g01452 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 262 IPR027417 -
Bach8g01452 490 CDD PRTases_typeI 346 461 IPR000836 -
Bach8g01452 490 FunFam Uridine kinase 273 488 - -
Bach8g01452 490 NCBIfam uridine kinase 70 269 IPR000764 -
Bach8g01452 490 CDD UMPK 71 269 IPR000764 -
Bach8g01452 490 Pfam Uracil phosphoribosyltransferase 287 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01452 Bach-Chr8 9987084 9993426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01452 1 490 PRT Gene Family AT5G40870 85.510 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01452 K00876 - gmx:100786137 870.537