Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01405 ATGTTGATACGCTGCGATTTTTGTGACTTCAAAACGGCGGTGCTCTACTGCGAAGCTGACTCGGCAAAGCTTTGCTTGTTATGTGACCAGCATGTCCACAAGGCCAATGCTCTCTCACTCAAGCACGTCCGTTTTCAGATTTGCGACTACTGTAGGAACGAAACCGCCACAATTCAGTGCCCTACTGATAGCCTTGTGCTATGCCAAGAATGCGATTTGGACGCTCACAACAACTCTTCGACCTCTTCATTCCATGAGCGTACCCAAGTTGAAGGGTTTTCTGGGTGTCCCTCAATTATTGAGCTCGCCGCAGTTTTTGGGTTTGATTTGAAACAGAAAGATTTCAACGCTATGGGTTTTGGGCCTCGCCAAAATGAGCACAATTTGAAGTACTTTCAGGAGTATATGGTCCCGAATGTTCATTCCTCTGTCTCTTCTGCGTTATCTAAAGGCCACAATTTGAAATTTGGAAATTGCAGGGACGATGCTTATGAGCAGTTGTTGGAGATGGCCAGGAGAAATTTAGATAAAGAAGTAGCTGAGTTGGGTCCAGGAACATCTCCGAGTAGATTAGCCCAACAAGGAGATGTGAAGAGCCTTGATTTGAACAATGGTGATGATGATGAATTGCTGCAGCAGCAAACGCCGTTCACGTCTTTACTTATGTTGCCAACTGATGGGGACTTGAGACAAACCGATTACGCAAGTGATGGAGATCTTCTGTGGGATTCCAATCCCTCATATGAGATGGCTCAGGTTTGGGATTTCCAATCAGGAAAACCAAGATATTGCGGAGAACCCAAGTTATTGATGTTTGATGGTCTCGAAGAAGCTTCCTTAATGATACCAGGAACATTTCAAGACATAGACAATATGAATTGCATGACTATTGGTGATGATCTTCTTTCAAGAAATAATCAATCAGATCAGTCGTCACCCAACCATGTAATGATGAAAGAAGGAAGCAACAAGAAACCCAGAGATGGGTTATCATCGGAGCCGAAGTTGATGGAATCCATAATTTACAATGGTACGGTCATGGAGCACCTTGTAGATGGGAGTGAGAATGCAAACATGGTGAGACCCAAGGTTAGCACAGAAGAGCTGGCAAAGAACAGAGGAGATGCAATGTTGCGGTACAAGGAGAAGAAGAAAACTAGAAGGTATGATAAGCACATTCGTTATGAATCAAGGAAAGCCAGGGCTGATACGAGGAAGCGGGTGAGAGGGCGATTTGTGAAGGCGAGTGATGCCACGGATGCTCAAGTATGA 1272 0.4465 MLIRCDFCDFKTAVLYCEADSAKLCLLCDQHVHKANALSLKHVRFQICDYCRNETATIQCPTDSLVLCQECDLDAHNNSSTSSFHERTQVEGFSGCPSIIELAAVFGFDLKQKDFNAMGFGPRQNEHNLKYFQEYMVPNVHSSVSSALSKGHNLKFGNCRDDAYEQLLEMARRNLDKEVAELGPGTSPSRLAQQGDVKSLDLNNGDDDELLQQQTPFTSLLMLPTDGDLRQTDYASDGDLLWDSNPSYEMAQVWDFQSGKPRYCGEPKLLMFDGLEEASLMIPGTFQDIDNMNCMTIGDDLLSRNNQSDQSSPNHVMMKEGSNKKPRDGLSSEPKLMESIIYNGTVMEHLVDGSENANMVRPKVSTEELAKNRGDAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVRGRFVKASDATDAQV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01405 423 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bach8g01405 423 MobiDBLite consensus disorder prediction 303 333 - -
Bach8g01405 423 CDD Bbox1_BBX-like 5 47 - -
Bach8g01405 423 MobiDBLite consensus disorder prediction 303 318 - -
Bach8g01405 423 ProSiteProfiles CCT domain profile. 373 415 IPR010402 GO:0005515
Bach8g01405 423 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bach8g01405 423 SMART bboxneu5 48 90 IPR000315 GO:0008270
Bach8g01405 423 MobiDBLite consensus disorder prediction 187 207 - -
Bach8g01405 423 Pfam CCT motif 373 415 IPR010402 GO:0005515
Bach8g01405 423 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach8g01405 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 418 - -
Bach8g01405 423 MobiDBLite consensus disorder prediction 181 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01405 Bach-Chr8 9665673 9668881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01405 2 417 C2C2-CO-like Transcription Factor Family AT2G33500 37.701 6.72e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach8g01405 CCT 9.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01405 - - ahf:112697135 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01405 8 9665673 9668881 Bach8g01405 8 9665673 9668881 ECH