Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01395 ATGGAGAGGGAGATGCTACCTAGAGCTCATGGCCTTCCTTGGATGGAAGGAGAAGTTGAAGATGCAGCATCTTGGACCAGAACTAACAACGAGGGCGAGCCCAAGGATGAGTACATTGCCATGGGTGGCCCTCTAACTTCCTTCAAATCAATGCTTGAAGGTGACTGGTACTTGAATACTGCTATTAATCCCCCTCACCAGGACCTCCCTAATCTCCCAAATCACCATGAAACCAGGGATATTGGCTTTTGCTCAAACCCAACTGATAATTTTCTCATACAGCCTATTGATTCGTCGTCTTCCTGTTCACCGTCATTCAATCTCGACCCATCACAGTCACAACCTTTTTTACCTCCCAAATCGTGCTTCTCTTCTCTATTCAATGTTGGTAACAACAACCCTTTTGACAATGGCTTCGATTTGGGCTCGGAAACTGGGTTTCTCCCTCCATTCCAGGGGAATCAGTCTTCAAATTCCCCTGGTTTGATGGGGTTCTCGGGATTAAATACTCAATCTCAGATGGGTACCATCGAACTGAGTTCAAGTTCAGAGTTTCCATCTACTCGGCTGCTGCCAGTAGCTGACAGTGCTACTGCACTTGGTAGCGGATTTACTCCAACGGCTTTAGAAGGTTTCGATAATTCTGGAAGTGCTCTGTTTCTAAACAGCTCTAAGGTTTTAAGACCTCTTGACGTATTTCCTCAAGTGGGGTCGCAACCCACTCTTTTTCAGAAGCGAAAGGCGCTTCGTCAAAACTCTGCTGGAGCTGATAAATTGGGGACTTTGGAGATTTCGGCATCGAGATTTGAGGATTCTTCAATGAGGTTGGAGAACATGGAGAGGAAGAGGAAGAGAACAGATGAGAGCGAAATCGAAGAATTGAGCTTCGATGCTTCAGGGTTGAATTATGATTCCGATGAGCTTAATGAGAGTGGTAGGGTGGAGGAGAATGGGAATAATGGAGGAAGCAATTCTAATGTAAATAGTACTGTTACTGGTGGAGAGCAGAAGGGAAAGAAAAAGGGGCTACCGGCGAAAAACCTCATGGCTGAGAGGCGGCGTAGGAAGAAGCTCAATGATAGGTTGTACATGCTTAGGTCGGTTGTGCCCAAGATTAGCAAGATGGACAGGGCTTCCATACTTGGGGATGCAATTGACTACTTGAAGGAGCTTCTGCAGCGGATTAATGATCTGCATAATGAGCTGGAGTCAGCTCCTCCTGGTTCAGTGCTGCCATCTTCCGCAAGCTTTCATCCTTCGACACCCACTCCACCAACTCTTCCTTGCCGGGTCAAGGAAGAACTATGTCCTAGCTCCTTGCCAAGCCCAAAAAACCAACCTGCAAGAGTGGAGGTTAGGGTAAGGGAAGGGAGAGCTGTCAACATCCATATGTTTTGCAGCCGCAGACCAGGTCTTTTGTTGTCCATTATGAGGGCTCTGGATAACCTTGGATTGGATGTTCAGCAAGCCGTTATTAGCTGCTTCAATGGCTTCGCTTTAGATGTTTTCAGAGCTGAGCAATGCAGAGAAGGCCAGGATGTGCTCCCCGAGCAAATCAAAGCTGTGCTGTTGGATTCAGCGGGTTTCCATGTATGA 1596 0.4712 MEREMLPRAHGLPWMEGEVEDAASWTRTNNEGEPKDEYIAMGGPLTSFKSMLEGDWYLNTAINPPHQDLPNLPNHHETRDIGFCSNPTDNFLIQPIDSSSSCSPSFNLDPSQSQPFLPPKSCFSSLFNVGNNNPFDNGFDLGSETGFLPPFQGNQSSNSPGLMGFSGLNTQSQMGTIELSSSSEFPSTRLLPVADSATALGSGFTPTALEGFDNSGSALFLNSSKVLRPLDVFPQVGSQPTLFQKRKALRQNSAGADKLGTLEISASRFEDSSMRLENMERKRKRTDESEIEELSFDASGLNYDSDELNESGRVEENGNNGGSNSNVNSTVTGGEQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESAPPGSVLPSSASFHPSTPTPPTLPCRVKEELCPSSLPSPKNQPARVEVRVREGRAVNIHMFCSRRPGLLLSIMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVLPEQIKAVLLDSAGFHV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01395 531 ProSiteProfiles ACT domain profile. 461 531 IPR002912 -
Bach8g01395 531 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 224 529 - -
Bach8g01395 531 MobiDBLite consensus disorder prediction 403 426 - -
Bach8g01395 531 MobiDBLite consensus disorder prediction 301 345 - -
Bach8g01395 531 FunFam BHLH transcription factor 338 406 - -
Bach8g01395 531 Pfam Helix-loop-helix DNA-binding domain 349 391 IPR011598 GO:0046983
Bach8g01395 531 Coils Coil 385 405 - -
Bach8g01395 531 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 342 391 IPR011598 GO:0046983
Bach8g01395 531 CDD bHLH_AtAMS_like 345 416 - -
Bach8g01395 531 SMART finulus 348 397 IPR011598 GO:0046983
Bach8g01395 531 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 415 IPR036638 GO:0046983
Bach8g01395 531 Gene3D - 335 405 IPR036638 GO:0046983
Bach8g01395 531 CDD ACT_UUR-ACR-like 462 522 - -
Bach8g01395 531 MobiDBLite consensus disorder prediction 314 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01395 Bach-Chr8 9559307 9563344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01395 24 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 56.883 2.15e-153 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach8g01395 HLH 2.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01395 - - pcin:129305251 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01395 8 9559307 9563344 Bach1g01868 1 31682050 31685419 BWGD
Bach8g01395 8 9559307 9563344 Bach8g01395 8 9559307 9563344 ECH