Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01375 TTTTGACTCAAGTCGCTACTCTACTCTGTTGCTTGCCTTGACGATTAGGGACTTGCTCTGTACTACAGTTCAAAGTTCAAGCTTTGGACGTAGTTTAGCTAACCCAGGAGAATATCCTAGTTGATCGGAGTCTAAGAATCGAGTATGAGTTTTCAAGACATCCAAGGTGGGCCCAAGCGACAACCCGGTGGGCGAATCCAGTCGCCGTCGCAGGCCGTGGCCGCTGGCATTTTTCAGATCAACACCGCCGTCGGTACTTTCCGACGACTCGTGGATGCCATTGGAACCGTTAAAGACACTCCACAGCACCGTCAAAATCTGCACAACACGAGGCAGCGGATATTGCAGCTGGTGAAGGATACTTCGGCTAAGCTCAAGTCCTTGTCCGAATCTGATCGCGATGATGCTACCACTCCTAGTAAGAAACTCGAAGATGCTAAACTAGCCCGAGACTTCCAAACCATACTGGAAGAATTCCAGAAAGTTCAGCAGCTTGCTTCTCAGCGTGAGTCAACTTATATCCCTGCTGCCCCTCCTTCTTCTCTACCAACAAGCTCTGGCTCTGGTGAATGGGAAACCTTGAACAAAGAACAAAAATGCAGGCAGGAGATACTCCCATTGGATAATGAGATTTCCTTCAATGAGGCCATGATTGAAGAAAGAGAGCAGGGGATTAGAGAGGTCGAAGAGCAAATTGGGGAAGTTAATGAAATATTCAAGGACCTAGCTGTTCTGGTTCATGAACAGGGGGTAGTCATCGATGACATTCACTCAAACATTGATTCTTCTGCTGGTGCAACAGCCCAAGCTAAAGTTCAGCTATCCAAGGCTTCAAAGAGTGTGAAATTCAGATGCTCATGGTGTTGGTGGGTACTTGTTGTTGTTGTGCTGGCACTGGTAATCTTTCTTCTTGTTCTCATTCTTTAGAGTGCAAGTGCATACGTGCTGTTTCCATATGGCTTGGCGGGACA 971 0.4727 MSFQDIQGGPKRQPGGRIQSPSQAVAAGIFQINTAVGTFRRLVDAIGTVKDTPQHRQNLHNTRQRILQLVKDTSAKLKSLSESDRDDATTPSKKLEDAKLARDFQTILEEFQKVQQLASQRESTYIPAAPPSSLPTSSGSGEWETLNKEQKCRQEILPLDNEISFNEAMIEEREQGIREVEEQIGEVNEIFKDLAVLVHEQGVVIDDIHSNIDSSAGATAQAKVQLSKASKSVKFRCSWCWWVLVVVVLALVIFLLVLIL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01375 260 SMART tSNARE_6 162 229 IPR000727 -
Bach8g01375 260 FunFam Syntaxin-22 like 160 260 - -
Bach8g01375 260 ProSitePatterns Syntaxin / epimorphin family signature. 173 212 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach8g01375 260 Pfam Syntaxin-like protein 26 125 IPR006011 GO:0016020
Bach8g01375 260 Gene3D - 12 132 - -
Bach8g01375 260 FunFam Syntaxin-22 like 16 129 - -
Bach8g01375 260 MobiDBLite consensus disorder prediction 1 21 - -
Bach8g01375 260 PANTHER SYNTAXIN 23 247 IPR045242 -
Bach8g01375 260 SMART SynN_4 10 123 IPR006011 GO:0016020
Bach8g01375 260 CDD SNARE_Qa 170 228 - -
Bach8g01375 260 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 167 229 IPR000727 -
Bach8g01375 260 Pfam SNARE domain 204 255 IPR000727 -
Bach8g01375 260 Gene3D - 161 260 - -
Bach8g01375 260 Pfam Syntaxin 169 202 IPR006011 GO:0016020
Bach8g01375 260 SUPERFAMILY t-snare proteins 19 222 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01375 Bach-Chr8 9419471 9421739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01375 1 246 SNARE and Associated Proteins AT5G46860 57.812 3.80e-96 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01375 - - gmx:100787141 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01375 8 9419471 9421739 Bach8g01375 8 9419471 9421739 ECH