Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01368 ATGGGTGATATAAACCAGGATAAGGATACCCATTCCCAGAGTCCCGTGCTTGCAATTGATGGTGATGCACCTACTGAAAGTGATGTCAAATTGAGTTCCAGGGACCAAAGAGAAGCTCTGCCGGGTGAGCCCAAGTGTATTATATGTGGGCGCTATGGTGAGTATATTTGTGATAAAACGGATGATGATGTATGCAGCTTGGAATGTAAACAAGCTCTGTTACACAGAATTGGCAGCTCACCAGTGCCTGTTGATACTCTTCCACCTAAAAAGTTACCTGCAGCTGATGAGTGTTTCTATGTTAGAGATGATGATTACGAGTCAGGAAATCCATCTTCAGCTAGGGATCAGGCTGAATTGCTAAGAAAGAAGCTTGACATTCACGTGAAGGGTGATGTAGTAGGACCAATTTTGTCGTTCACTTCCTGTAACTTTCCTGACAAGCTGCTGCACAATATAGAAGCTGCAGGATATGACATGCCAACACCCGTACAGATGCAAGCAATCCCAGCGGCAATGATGGGCAAAAGCTTGCTTGTGTTGGCTGATACAGGATCTGGAAAGTCTGCTTCATTTCTTATTCCAATGGTGTCTTGTTGTGCAAGTCGTCGTCTTGAGCATGCTTCTAACAAGAAGAAGCCGTTAGCTGTGGTTTTAACACCTACCAGAGAGCTTTGTATACAAGTTGAGGAGCATGCTAAATTGCTTGGAAAGGGATTACCTTTTAAAACTGCGCTTGTGGTTGGCGGTGATGCCATGGCCAGACAACTCTATCGCATTCAGCAAGGAGTCGAAATGATTGTGGGAACCCCAGGAAGGCTTATTGATCTTTTAACAAAGCATGATATTGACTTAGATGATGTGATGACCTTTGTTGTGGATGAGGTTGATTGCATGCTGCAAAGGGGTTTCCGAGATCAGGTCATGCAGATATACAGGGCTTTGTCGCAGCCCCAGGTGTTAATGTATTCTGCAACAATCTCACCTGAGTTACAGAAGATGGCAAACTCTCTTGCAAAAGGTACTGTAGTTATCTCTGTTGGTGAGCCTAATAGACCAAATAAGGCTGTGAAGCAGCTTGCTATTTGGGTTGAGTCAAAGCAAAAGAAAAAGAAGCTGTTTGACATTTTGACAAGCAAGCAGCATTTTAAGCCACCTGCTGTTGTATATGTGGACTCTAGACTTGGGGCTGATCTTCTGGCTAATGCAATTACAATCACCATTGGAATTAAAGCACTAGCAATTCATGGAGAGAAGTGTATGAAGGAAAGGAGAGAAATAATGAGGTCCTTTGTGGTTGGTGATGTCCCAGTTGTTGTGGCAACTGGAGTTTTAGGTAGGGGAGTTGATCTATTGGGTGTAAGACAGGTAATTGTATTTGACATGCCTAATTCCATTAAAGAGTATGTACATCAGATTGGAAGAGCATCAAGAATGGGAGAAGAAGGTCAAGCTATAGTTTTTGTGAATGAAGAGAATAAGAATGTCTTTGCAGAGTTGGTTGAAGTTTTAAAATCGAGTGGAGCAACTGTACCTAGGGAACTTGCTAATTCCCGGTATACCACAGGATTTTTCTCTGGTGGCAAGGGTCTGAAAAAGAGAAAGCATAGATCATGA 1617 0.4292 MGDINQDKDTHSQSPVLAIDGDAPTESDVKLSSRDQREALPGEPKCIICGRYGEYICDKTDDDVCSLECKQALLHRIGSSPVPVDTLPPKKLPAADECFYVRDDDYESGNPSSARDQAELLRKKLDIHVKGDVVGPILSFTSCNFPDKLLHNIEAAGYDMPTPVQMQAIPAAMMGKSLLVLADTGSGKSASFLIPMVSCCASRRLEHASNKKKPLAVVLTPTRELCIQVEEHAKLLGKGLPFKTALVVGGDAMARQLYRIQQGVEMIVGTPGRLIDLLTKHDIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRALSQPQVLMYSATISPELQKMANSLAKGTVVISVGEPNRPNKAVKQLAIWVESKQKKKKLFDILTSKQHFKPPAVVYVDSRLGADLLANAITITIGIKALAIHGEKCMKERREIMRSFVVGDVPVVVATGVLGRGVDLLGVRQVIVFDMPNSIKEYVHQIGRASRMGEEGQAIVFVNEENKNVFAELVEVLKSSGATVPRELANSRYTTGFFSGGKGLKKRKHRS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01368 538 Pfam HIT zinc finger 44 70 IPR007529 -
Bach8g01368 538 Pfam DEAD/DEAH box helicase 162 333 IPR011545 GO:0003676|GO:0005524
Bach8g01368 538 Gene3D - 348 521 IPR027417 -
Bach8g01368 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 347 IPR027417 -
Bach8g01368 538 CDD SF2_C_DEAD 357 489 - -
Bach8g01368 538 Gene3D - 25 81 - -
Bach8g01368 538 SMART helicmild6 398 480 IPR001650 -
Bach8g01368 538 SMART ultradead3 157 360 IPR014001 -
Bach8g01368 538 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 138 166 IPR014014 GO:0003724
Bach8g01368 538 MobiDBLite consensus disorder prediction 1 36 - -
Bach8g01368 538 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 169 345 IPR014001 -
Bach8g01368 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 494 IPR027417 -
Bach8g01368 538 Gene3D - 107 347 IPR027417 -
Bach8g01368 538 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 135 517 - -
Bach8g01368 538 FunFam DEAD-box ATP-dependent RNA helicase 41 26 82 - -
Bach8g01368 538 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 356 519 IPR001650 -
Bach8g01368 538 Pfam Helicase conserved C-terminal domain 370 480 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01368 Bach-Chr8 9386524 9388532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01368 132 517 Eukaryotic Initiation Factors Gene Family AT3G19760 28.133 3.26e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01368 K19466 - gmx:100781473 835.484