Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01353 ATGGTTAGTGCGATAAAGGCCGCTATTGGAGATGTAGTGTTGACTTTTATGTGGGTATTTTGCGCATCCATGCTGGGATTAGCCACTAACACGATTACAACACAACTCGGGCTTCAGCATGTAACCTACAATGGTTTTGCTTACCCTCATGTTATCGTCACCACCGTCCTTGTTTTCATCCTCGTCTTCGTCTTCACGGTCATTGGCAATGCCTTGGGTGGCGCTAGCTTCAACCCCACCGGAACTGCTTCCTTTTATGCAGCTGGTGTCGGCTCAGACACCGTTACCTCCATGGCTCTCCGTTTCCCCGCTCAGGCACTTGGTGCCGTGGGTGGTGCTCTGGCAATTACGGAAGTGATGCCGCCAAAGTACAAGCACATGATTGGCGGCCCTTCTTTGAAAGTTGACTTGCATACTGGAGCTATTGCTGAAGGTGTACTGACATTTTTTATTAGTTTTATTGTCCTTTTTATCATACTCAGGGGTCCTCGTAGTGAATTAATGAAGACTTGGTTACTTGCCGTGGCAACCGTGGCATTGGTCATGCTTGGTTCTGCTTACACTGGACCGTCCATGAATCCTGCCAACGCCTTTGGTTGGGCATACTTGGACAACTGGCACAACACATGGGACCAATTCTATGTTTATTGGATTTGCCCCTTCATCGGAGCAATATCGGCTGCTTGGCTGTTCCGGTTTGTGTTCCCCCCACCAAAACCAAAAAAGAAGAAAGCCTAA 738 0.4837 MVSAIKAAIGDVVLTFMWVFCASMLGLATNTITTQLGLQHVTYNGFAYPHVIVTTVLVFILVFVFTVIGNALGGASFNPTGTASFYAAGVGSDTVTSMALRFPAQALGAVGGALAITEVMPPKYKHMIGGPSLKVDLHTGAIAEGVLTFFISFIVLFIILRGPRSELMKTWLLAVATVALVMLGSAYTGPSMNPANAFGWAYLDNWHNTWDQFYVYWICPFIGAISAAWLFRFVFPPPKPKKKKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01353 245 Gene3D Glycerol uptake facilitator protein. 1 244 IPR023271 -
Bach8g01353 245 FunFam Aquaporin SIP1-1 2 245 - -
Bach8g01353 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 PANTHER AQUAPORIN SIP1-1 4 243 IPR044222 GO:0015250
Bach8g01353 245 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g01353 245 SUPERFAMILY Aquaporin-like 3 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01353 Bach-Chr8 9286698 9289379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01353 2 245 Major Intrinsic Protein MIP AT5G18290 53.226 8.21e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01353 K09875 - gmx:100792787 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01353 8 9286698 9289379 Bach8g01353 8 9286698 9289379 ECH