Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01294 ATGAGTTCGCAGCTCGTCACTGATGATGTTAATGGTTTCAAAGGAAAGATGAACCTTTTACCACCTAATACTCTTGTGCTATCTCCTCAATCTGCTTTATCTAACGCTTTTGGGGTTATGGGTAGTGGTGGTCAGATAGAGTCTAACCAGTCTGAGCTGGGTTTTCAGATTCTGAGCCCTTCATTTAATCCAGAAGAAAGCTGGGGAAGAAAGAGAATCGATGATGAAGGTGATGGATACTATGGAGCTGAGAAAAAGAGCTTGTCTTTGAAACTTGGTGTCGAAACGGAAGCTAAGAGCTCTGCTAGCGCAAGAAATGGCCACACCAAGCTTTGCGCTAGAGGTCACTGGAGACCAGCTGAAGACGCCAAACTCAAAGAGCTTGTAGCTGAGTATGGCCCTCAAAACTGGAACTTGATCGCTGACCATCTTGAAGGAAGATCAGGAAAGAGTTGTAGATTGAGGTGGTTTAATCAGCTAGATCCTAGGATTAACAGAAGAGCTTTCTCTGAGGAAGAAGAGGAGAAGCTCTTAGCCGCTCATAAACTGTATGGGAACAAATGGGCAATGATTGCTAGGCTCTTCCCTGGGAGGACTGATAATGCAGTGAAGAACCACTGGCATGTGATCATGGCAAGGAAGCACAGAGAGCAATCAAGTGTTTATAGGAGGAGAAAGCCCAACAACAACACTGAAAACCTTCCGAAGGGATTAAATTTGACTTTAACAAACAATGCAGGCAGTGAATCACCCATGTCAAGTACCATAGATGAATCTGCTTCAACCTGCACTAATTTCTCCCTCACTCCCTCTTCATCCAAACAGCCTCCTATGAGTTTGCCTAAACTGAGCCCAGTGATGGGGACATCTGGAGAAAGAGTGGTGACAGTGGGGGATATGGGTTTTGATAAGTTCTTTATTGGTTGGAGGGGATCATCATGTGAGGCTGGACCCATGTGGAAACCTGTGGGTTTAGACCAATCTGGTTATTCAGATTCCAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCCACCAACCGGACCAATCTCTCAATTTCTGGGGAAAGTGAAAATGTGGGTGAGAAGGTTAACATGGCATTCATTGATTTTCTTGGAGTAGGAGCTACATAA 1131 0.4465 MSSQLVTDDVNGFKGKMNLLPPNTLVLSPQSALSNAFGVMGSGGQIESNQSELGFQILSPSFNPEESWGRKRIDDEGDGYYGAEKKSLSLKLGVETEAKSSASARNGHTKLCARGHWRPAEDAKLKELVAEYGPQNWNLIADHLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEEKLLAAHKLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHREQSSVYRRRKPNNNTENLPKGLNLTLTNNAGSESPMSSTIDESASTCTNFSLTPSSSKQPPMSLPKLSPVMGTSGERVVTVGDMGFDKFFIGWRGSSCEAGPMWKPVGLDQSGYSDSNSEVSVSESVATNRTNLSISGESENVGEKVNMAFIDFLGVGAT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01294 376 CDD SANT 176 208 IPR001005 -
Bach8g01294 376 SMART sant 113 162 IPR001005 -
Bach8g01294 376 SMART sant 165 213 IPR001005 -
Bach8g01294 376 Gene3D - 114 165 - -
Bach8g01294 376 Gene3D - 167 236 - -
Bach8g01294 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 160 IPR017930 -
Bach8g01294 376 Pfam Myb-like DNA-binding domain 166 209 IPR001005 -
Bach8g01294 376 Pfam Myb-like DNA-binding domain 114 160 IPR001005 -
Bach8g01294 376 ProSiteProfiles Myb-like domain profile. 161 211 IPR001005 -
Bach8g01294 376 SUPERFAMILY Homeodomain-like 114 207 IPR009057 -
Bach8g01294 376 MobiDBLite consensus disorder prediction 224 238 - -
Bach8g01294 376 CDD SANT 117 158 IPR001005 -
Bach8g01294 376 MobiDBLite consensus disorder prediction 218 238 - -
Bach8g01294 376 FunFam MYB transcription factor 114 165 - -
Bach8g01294 376 PANTHER MYB PROTEIN-RELATED 114 249 - -
Bach8g01294 376 ProSiteProfiles Myb-like domain profile. 114 160 IPR001005 -
Bach8g01294 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 215 IPR017930 -
Bach8g01294 376 FunFam MYB transcription factor 167 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01294 Bach-Chr8 8816034 8817407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01294 113 249 MYB Transcription Factor Family AT1G69560 73.469 6.64e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g01294 Myb_DNA-bind_6 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01294 K09422 - qsa:O6P43_009928 432.95