Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01290 ATGGGGATGCCTCCTTGCTGTGACAAAGCTGGCATCAAGAAGGGTCCCTGGACACCTGAGGAGGATATCATCCTTGTTTCTCACATCCAAGAACATGGCCCAGGAAATTGGAGATCAGTGCCTACCAATACTGGGTTGTTAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACTAACTACCTCAGACCAGGAATCAAGAGAGGCAACTTTACTCCCCATGAGGAAGGGATGATAATTCACCTGCAAAAGCTATTGGGTAACAAATGGGCAGCCATAGCTTCTTACCTTCCACAAAGAACAGATAATGACATAAAGAACTATTGGAATACCCATTTAAAGAAGAAGCTCAAGAAATTTCAAGCAGCTTTGGACCCCCACCTGCCATCAGACTCAACAACTACTGGTCAGTTTTTAAATAAGAGCTTTAATGATAGAAGAGGTAATTTAGATATAAGCAGCAACCATCCCTCCTCCTCCTTTGGACTTAGTCAGCCTTCCACCACCACCTATGCCTCAAGCACTGAGAACATCTCAAGGCTTTTAGAAGGCTGGATGAGGTCTTCTCCAAAGCCAGATACCCTTAATCTCAAAGAGCTTCAAAACAATGAGAACTTGGAAAACAATATGCTGGTAAAGTCTGCATCAGTTCCTGCTTTTGGGTCTCTCCAAACCAAAGATGAGCGAGAAGGTGGAGGTGTAGTCTATCATGAAGAGTTTGATTCCATTGTATCGTTTGAGAACCTGAACAATGCTGGTTGGGACAACTCTACTTGTGACTCTATACCAGATGAAAAGAATGCTGAAGCTGCAGAGGGTGCTGATGAGAAGGTTCAAGATATAGCAGAGAGAAGTAAGCAAAGATCTGAGAACAGCAGTAATCCTCCATTGTCGTTTCTTGAAAAGTGGCTCCTGGATGAAAATGTTGGTCAGGTAGGGGAGATGATGGAGTTGTCTCCTATGTTCTAA 966 0.4379 MGMPPCCDKAGIKKGPWTPEEDIILVSHIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQKLLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAALDPHLPSDSTTTGQFLNKSFNDRRGNLDISSNHPSSSFGLSQPSTTTYASSTENISRLLEGWMRSSPKPDTLNLKELQNNENLENNMLVKSASVPAFGSLQTKDEREGGGVVYHEEFDSIVSFENLNNAGWDNSTCDSIPDEKNAEAAEGADEKVQDIAERSKQRSENSSNPPLSFLEKWLLDENVGQVGEMMELSPMF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01290 321 CDD SANT 69 112 IPR001005 -
Bach8g01290 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bach8g01290 321 MobiDBLite consensus disorder prediction 145 168 - -
Bach8g01290 321 CDD SANT 16 61 IPR001005 -
Bach8g01290 321 Gene3D - 69 135 - -
Bach8g01290 321 MobiDBLite consensus disorder prediction 256 296 - -
Bach8g01290 321 FunFam MYB-related transcription factor 13 66 - -
Bach8g01290 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 215 - -
Bach8g01290 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach8g01290 321 FunFam Transcription factor MYB60 68 137 - -
Bach8g01290 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach8g01290 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach8g01290 321 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach8g01290 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach8g01290 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bach8g01290 321 Gene3D - 13 66 - -
Bach8g01290 321 SMART sant 13 63 IPR001005 -
Bach8g01290 321 SMART sant 66 114 IPR001005 -
Bach8g01290 321 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01290 Bach-Chr8 8781856 8783093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01290 1 151 MYB Transcription Factor Family AT5G62470 73.248 2.17e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g01290 Myb_DNA-binding 4.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01290 K09422 - gmx:100817854 436.802