Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01275 ATGGGGAGGAAGCGAAAGCTGGGGCCTAAATCCACCGCCGAATCCATCGAACCTCCACTGAAGCAGCAGCAACAACAGCAACAAATAGAAGTGCAGGTCGTACAGGAAGAGACCCAATTGGAAGTTGAAGATCAAGAGAATGGGACTGGATACGAGGAAGTTGAAGAAGAAGTAGAAGAAGAGGCGGAAGAGGAAGAAGAAGATGACGATGACGTTGCCCAAAACGCCAATGATCAGACTGGTAAGGCTCCGTCAACGTCATCGGCTGCGACATCCACCGAAGATCAAGGTGGTAAGGATGCTGATGAAGATGAGGAGCCGATACCGGAGCTTCTGGAACCGTTCACCAAGGAGCAAATTCTAAATCTGCTTTGCGAAGCTGCGGATGAACATCGTGACGTGGCAGATCGGATCCGTAAAGTAGCTGATGAGGATCCCGCTCACAGGAAAATCTTTGTTCATGGCCTCGGATGGGACACAAACGCCGAGACCCTGATTAACGTTTTCAAGCAATACGGGGAAATTGAAGATTGCAAAGCTGTATGTGATAAGATGTCGGGGAAGTCCAAGGGTTATGGTTTCATCCTGTTCAAAACACGTCGTGGGGCTCGCAATGCGCTGAAGCAACCACAGAAGAAGATTGGGAACCGGATGACGGCCTGCCAGCTGGCATCAGTTGGCCCAGTTCAACAGCCAGCCGCCGCACAACCAGCTCCGTCACCGCCCTTATCAGAGTATACCCAGAGGAAGATTTACGTGAGCAATGTTGGGGCGGATTTGGATCCTCAGAAGTTGTTCATGTTCTTCTCCAAGTATGGGGAGATAGAGGAGGGACCGTTGGGACTTGACAAGATGACTGGGAAACCAAAAGGTTTCTGTTTGTTTGTATACAAGAGCATTGACAGTGCCAAAAGGGCATTGGAAGAACCACATAAGGAATTTGAAGGCCATGTTTTGCACTGTCAGAAAGCAAACGATGGTCCAAAGCCAGGAAGGGCTCAACATCAACAACACCAGAACCCTCAAAGACCCCAATTCCAGAGGAATGAGAACCCTAGCTTTGCTGGCGGGGCTGCTACTGGACCAGGGCATTTGATGGCACCATCGGGATCAGGAATTGCGTTTAACCAGGGTGCAGCGGCTACTCAAGCACTGAATCCGGCTCTTGGGCAGGCCTTGACAGCACTGCTTGCGGCTCAAGGTGCTGGCTTGGGGCTGACTAATTTGTTGGGAACTCTGGGATCAGCTGCTGCGGTAAACCCAGGTGTTCCTGCTGCGGGCCATGGGGTACAGGGTGGATACGGTAACCAGTCAAATATAAGCCCTGGAGTTATTGGAGGATATGCAAACCAGGGTGGCTTGCAAGGGGCATATGCGAACCAGCAGGTGGGGCAAAGTGGATCAGGAAGAGGGCAGCATGGTGTCGGGCAGTATGGTGGCGTTGCCCCTTATATGGGGCACTAG 1464 0.5164 MGRKRKLGPKSTAESIEPPLKQQQQQQQIEVQVVQEETQLEVEDQENGTGYEEVEEEVEEEAEEEEEDDDDVAQNANDQTGKAPSTSSAATSTEDQGGKDADEDEEPIPELLEPFTKEQILNLLCEAADEHRDVADRIRKVADEDPAHRKIFVHGLGWDTNAETLINVFKQYGEIEDCKAVCDKMSGKSKGYGFILFKTRRGARNALKQPQKKIGNRMTACQLASVGPVQQPAAAQPAPSPPLSEYTQRKIYVSNVGADLDPQKLFMFFSKYGEIEEGPLGLDKMTGKPKGFCLFVYKSIDSAKRALEEPHKEFEGHVLHCQKANDGPKPGRAQHQQHQNPQRPQFQRNENPSFAGGAATGPGHLMAPSGSGIAFNQGAAATQALNPALGQALTALLAAQGAGLGLTNLLGTLGSAAAVNPGVPAAGHGVQGGYGNQSNISPGVIGGYANQGGLQGAYANQQVGQSGSGRGQHGVGQYGGVAPYMGH 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01275 487 MobiDBLite consensus disorder prediction 332 354 - -
Bach8g01275 487 SUPERFAMILY RNA-binding domain, RBD 230 349 IPR035979 GO:0003676
Bach8g01275 487 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 151 217 IPR000504 GO:0003723
Bach8g01275 487 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 251 320 IPR000504 GO:0003723
Bach8g01275 487 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 149 226 IPR000504 GO:0003723
Bach8g01275 487 MobiDBLite consensus disorder prediction 321 365 - -
Bach8g01275 487 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 37 340 - -
Bach8g01275 487 MobiDBLite consensus disorder prediction 1 105 - -
Bach8g01275 487 SMART rrm1_1 150 222 IPR000504 GO:0003723
Bach8g01275 487 SMART rrm1_1 250 322 IPR000504 GO:0003723
Bach8g01275 487 MobiDBLite consensus disorder prediction 37 74 - -
Bach8g01275 487 SUPERFAMILY RNA-binding domain, RBD 146 231 IPR035979 GO:0003676
Bach8g01275 487 Gene3D - 231 359 IPR012677 -
Bach8g01275 487 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 249 326 IPR000504 GO:0003723
Bach8g01275 487 MobiDBLite consensus disorder prediction 16 35 - -
Bach8g01275 487 Coils Coil 48 79 - -
Bach8g01275 487 MobiDBLite consensus disorder prediction 76 95 - -
Bach8g01275 487 Gene3D - 21 230 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01275 Bach-Chr8 8693377 8694840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01275 248 366 C2H2 Transcription Factor Family AT2G19380 31.967 1.09e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01275 K12741 - qsa:O6P43_006267 551.206