Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01252 ATGTCGAGTAGCAGAGACACCCATTGGTGTTATGGTTGCAGGAGGCCATTTCGTCTGCGAGGGCGATATGTCATTTGCCCCCGCTGTAATGGGGGATTTGTTCAAGAGCTTAATGGCATGATGCATATGAGTCCACTGGAATTCTTTGGACCAGACAATGATGAAGAACAGGACCGACAGTTTGGACTTATGGAAGCCTTCTCTGCCTTTACGAGGCATCGGTTGGCAGATAGAAGCAGTAACCATGATATCAGGACACGATCAGATTCGATTCCTGAACACAGTCCAGGATTTGCTCCTTTATTGATCTTTGGTGGCCAGCTTCCATTTAGATTTTCTGGACATGGTGGCTTTGAAGCTCTCTTTAGTGGGACTCCTGGAATTGCTCGGACACGAGGTAATACAGGTGATTATTTTATTGGTCCTGGTCTGGAAGAATTGTTTGAACAACTTTCAGTTAATGATCGGCGAGGCCCTCTGCCAGCATCCAGTTCTTCGATAGATGCAATGCCTACTATTAAGATCACACAGAGGCATCTTCGTTCTGATTCACATTGTCCAGTATGCAAGGATAAATTTGAGCTGGGGTCTGAAGCAAGGCAAATGCCTTGTAATCATATGTATCACTCAGATTGTATTGTCCCATGGTTGGTACAGCACAACTCCTGCCCTGTTTGCCGCCAGGAGTTGCCACCTAACTGCAGTTCGAATGGCGGAAGTAGAAGCAGTCATAGTAGCAATACTAGTGGAAGGGTAAATGGTAGGGAAAGCCAGAGAAGGCGGAATCCATTTTCTTCTTTGTGGCCTTTCCGTCCATCTAATTCTACTAGCACTAATGGAGCCGCTGGAAGCAGCTCACCAACGCCTTCCATCCCTGAGAACAACCATCAAACGGGATATTCTGGTTGGCCATTTGACTAG 921 0.4658 MSSSRDTHWCYGCRRPFRLRGRYVICPRCNGGFVQELNGMMHMSPLEFFGPDNDEEQDRQFGLMEAFSAFTRHRLADRSSNHDIRTRSDSIPEHSPGFAPLLIFGGQLPFRFSGHGGFEALFSGTPGIARTRGNTGDYFIGPGLEELFEQLSVNDRRGPLPASSSSIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPNCSSNGGSRSSHSSNTSGRVNGRESQRRRNPFSSLWPFRPSNSTSTNGAAGSSSPTPSIPENNHQTGYSGWPFD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01252 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 234 IPR013083 -
Bach8g01252 306 SUPERFAMILY RING/U-box 166 233 - -
Bach8g01252 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 81 231 - -
Bach8g01252 306 SMART ring_2 186 226 IPR001841 -
Bach8g01252 306 Pfam zinc-ribbon 7 37 IPR039525 GO:0061630
Bach8g01252 306 MobiDBLite consensus disorder prediction 234 306 - -
Bach8g01252 306 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Bach8g01252 306 CDD RING-H2_RNF126-like 186 227 - -
Bach8g01252 306 Pfam Ring finger domain 185 227 IPR001841 -
Bach8g01252 306 FunFam E3 ubiquitin-protein ligase RING1-like 149 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01252 Bach-Chr8 8544766 8545686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01252 53 233 C3H Transcription Factor Family AT5G01980 37.566 2.16e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01252 K11982 - qsu:112031639 473.011