Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01247 ATGTCAGATAGAATCTCAGTTGGAGATGCCGAGGACAGAAAGGTCAAGCGCAAGCTCGAGACTGAGAATGAGAATGAGAAGGAGACAGAGGATTTTCTGACTCTGAGACTTTGTAGCAATTACAGCATGGGTGGTGAAGTCTCGCCCTCAAGCTCAGGAACGATAGAATCTGGTTCTTCTGCTCCAAAAAGTGTGGGTGTGGTGGTGGATCCCTCGTCCCAGCGGCCCGTGTTCGCTTGCAGGATTTGCGGGAAAGAGTTCTACTCTTCGCAATCGTTAGGAGGGCATCAGAATGCCCATCGGCAGCGTGACCAGATCAAGTTAAGCAAAGAAATGGAGTCGGGCACTTTAAGTTTAGGGCAACCAGCTTCTCCTTTTTACCCTAATTTACTACCCGTGCCCAATCTTCCAATCCGTGGTGGGTCCCCTTCATCTCAATATGGGGTCCACATGCATCAGCACCCAGTTGCAGCAGGAGATATGTCTTGGCCTCGTCATGGTTATGGACATGGCTCTGAGCTGCTCAATTCTCCCCCGAGCGCCAACATATATGGGCTTGGAAGCTCTTATGGTACCGCTGCAACTACTGTTGGTGTTGCTGGTGGGTTTGGCTCTCCTTCTTCACTTGCCATTCCCAATGCAAATCCAGGCAATCCTGCTGCTGCTGCTGCTGTCAATATTGGAGGCCTTCAGGAAAATCGCAATGTGAGGAACAACCAGCAGCAAGGTTCAGCCACAGCCACAGGCGAAGGGGATGGACTAGACATGACCCTCAGAGTGGGTGCGAGAGGGTCAGGGGAAGGGGAAGGGGAAGGGCAAGACCTAGACTTGTCCCTCAGCCTTTAA 846 0.5177 MSDRISVGDAEDRKVKRKLETENENEKETEDFLTLRLCSNYSMGGEVSPSSSGTIESGSSAPKSVGVVVDPSSQRPVFACRICGKEFYSSQSLGGHQNAHRQRDQIKLSKEMESGTLSLGQPASPFYPNLLPVPNLPIRGGSPSSQYGVHMHQHPVAAGDMSWPRHGYGHGSELLNSPPSANIYGLGSSYGTAATTVGVAGGFGSPSSLAIPNANPGNPAAAAAVNIGGLQENRNVRNNQQQGSATATGEGDGLDMTLRVGARGSGEGEGEGQDLDLSLSL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01247 281 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Bach8g01247 281 PANTHER ZINC FINGER PROTEIN JAGGED 50 280 IPR045320 GO:0003700
Bach8g01247 281 MobiDBLite consensus disorder prediction 1 31 - -
Bach8g01247 281 MobiDBLite consensus disorder prediction 239 281 - -
Bach8g01247 281 Gene3D Classic Zinc Finger 66 123 - -
Bach8g01247 281 MobiDBLite consensus disorder prediction 46 61 - -
Bach8g01247 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Bach8g01247 281 MobiDBLite consensus disorder prediction 46 67 - -
Bach8g01247 281 Coils Coil 16 36 - -
Bach8g01247 281 SUPERFAMILY beta-beta-alpha zinc fingers 76 104 IPR036236 -
Bach8g01247 281 Pfam C2H2-type zinc finger 77 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01247 Bach-Chr8 8512653 8513498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01247 77 183 C2H2 Transcription Factor Family AT5G01860 37.288 1.81e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g01247 zf-C2H2_6 9.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01247 - - aprc:113874385 79.3369