Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01239 ATGAGGGAGGATGACACTAATTGGTTCTCGAGATGGGAAGAGGAACTTCCTTCCCCTGAAGAACTCATGCCCCTCTCCCAAACCCTAATCACTCCTGATCTTGCTTTGGCTTTTGACATCCGAAACCCACATAGTACCTGCCCTCAACAAATCCCGCAACCACCTCCTCCTTCCAATCCCTTGCCTTCTCCTGGCAATCCCAACCAACCCAATTCAGCTGAATTTGCAGATTCCGCTGAGTTGGGTTCTGGGACTGGTGGTGAGGAACCCGCTCGCACCCTCAAGCGCCCACGCCTTGTTTGGACTCCGCAACTTCACAAAAGGTTTGTTGATGCGGTGGCACATTTGGGGATAAAAAATGCTGTGCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACACGGGAAAACGTTGCCAGTCATTTGCAAAAATACCGGCTTTATCTCAAGCGCATGCAAGGACTGTCCAGCGGAAGTGGTGGTGGTGGTAGCGGCGGTGGCGGAGGAGCTGGAGGTGGATTGGCTGCCAGCGCCGATCCTGCAACTGACCATTTATTTGCGAGTTCACCTGTTCCACCCCATTTCTTGCATCCAGCGCGGCCCAATTCGGACCATTTCTTGCCGTTTGTGCAAGTCCCGGCTCTGCAGCACCACCATCATCAACAGCAGATGGCGGCAGCAGCAGCTGTCGCCGCCCATCCGCAATTACAGCCACAGTATCATAGGCAGGTGGGACATTTTGGGTCATCTCCAAATGGGCATTTTGAGCATCCATTCCTGCCGAGGCAATCTCAGCCGCTTCACAGGATAGGGGCGCCGGTTCACAATGCAGTACCTGGTTATGTAGAGGACATGGAATCAGCTAATGCTGCGGGAGGGAGAAAGGAGGCAACAATGTCTGTAAGCTTGTCTTCGAAATAGTCAATACCTTCTCCACGTGTTTAACATAATCCAAAGTGTAGCCGTTTGGGAAGTTTTCCATTGGCATTCATGGCAGGAATGGTTGAAGCAACTAGTATGGTGATTATGAGCTTGTTAGTTGAGAGAAATATTCATATCGCTCATTGGATAACTAAGGAAGTAAATTTTGGCAGGCACAACTGGTTGTGAATTCTTCAACTATATTCCATGAGCCTCTATTGTCGAAGACT 1157 0.503 MREDDTNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPHSTCPQQIPQPPPPSNPLPSPGNPNQPNSAEFADSAELGSGTGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGSGGGGSGGGGGAGGGLAASADPATDHLFASSPVPPHFLHPARPNSDHFLPFVQVPALQHHHHQQQMAAAAAVAAHPQLQPQYHRQVGHFGSSPNGHFEHPFLPRQSQPLHRIGAPVHNAVPGYVEDMESANAAGGRKEATMSVSLSSK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01239 308 MobiDBLite consensus disorder prediction 1 21 - -
Bach8g01239 308 MobiDBLite consensus disorder prediction 40 95 - -
Bach8g01239 308 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 266 IPR044841 GO:0003700|GO:0006355
Bach8g01239 308 MobiDBLite consensus disorder prediction 158 178 - -
Bach8g01239 308 Gene3D - 93 155 - -
Bach8g01239 308 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
Bach8g01239 308 FunFam Two-component response regulator 92 155 - -
Bach8g01239 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Bach8g01239 308 MobiDBLite consensus disorder prediction 1 18 - -
Bach8g01239 308 MobiDBLite consensus disorder prediction 48 67 - -
Bach8g01239 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Bach8g01239 308 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01239 Bach-Chr8 8428952 8430507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01239 1 301 G2-like Transcription Factor Family AT3G10760 56.461 1.16e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bach8g01239 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01239 - - qsa:O6P43_006330 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01239 8 8428952 8430507 Bach8g01239 8 8428952 8430507 ECH