Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01238 GGAGTATTCATTTCGCAGTGATCTCTTTTTCACGCGTTCTTACGATTCAATGGCTTCAAGACCCGTTGTTCCGCAGCAGGCCGTCAGGGGTGAGGGAGTTATTGGGGGAGGTAAGCAGCAGAAGAAGAATGGTGCAGCTGAGGGAAGAAATCGCAGAGCACTGGGTGATATTGGAAATCTAGTTACCGTTAAAGGAATAGAAGTCAAACCTAACCGCCCCATCACGAGGAGCTTTTGTGCCCAACTACTTGCAAATGCACAAGCTGCCGCAGCTGCTGAAAATAACAAGAAAAAGGCTTGTCCTAATGTGGTTGGAGCCCCTCCGGTTCTTGATGGGGCTGTAGTTACTAAGAGACCTGTGGCACCTAAAGGGGCTGAGAAGAAAGTCACCGTTAAACCAAAGCCTGAAGAAGTTATTGAAATAAGCTCAGACAAAGAGGAGGTTAAGCAAGAGAAGTGTGTGAACAAGAAAAAGGAAGAAGGAAGAGAAGTGTGTGGACAAGACAAAGAGGCGGTTAAGCAAGAGAAGTGTGTGAACAAGAAAAAGGAAGAAGGAAACTCCAGGAAGAAATCACAGACTCTTACTTCAGTTCTTACAGCTCGAAGCAAGGCAGCATGTGGTCTGACTAACAAACCAAAGGAGCAAATTGTTGACATTGATGCAGCTGACGCTGGTAATGAGCTTGCTGCCGTGGAATATATTGAAGACATCTACAAGTTCTATAAGCTGGTGGAGAATGAGAGCCGCCCACATGACTATATGGACTCTCAGCCTGAACTTAATGAAAGGATGAGAGCTATATTGGTTGATTGGCTGATAGATGTCCACAGCAAGTTTGACCTTTCGCTTGAAACTCTTTATTTGACTATCAACATCATCGATCGGTTCCTTGCAATCCAAACTGTGCCAAGGAGGGAGCTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCTTCCAAGTATGAAGAAATCTGGCCCCCTGAGGTGAATGACTTTGTGTGCCTCTCAGACAGAGCGTACACTCATCAACAGATACTGGTGATGGAGAAAATCATACTTGGCAAGTTGGAATGGACTTTGACTGTGCCTACACGTTATGTGTTCCTTGTTCGTTTCATCAAGGCATCAATTCCTGATCAAGAATTGGAAAACATGGTCCACTTTCTTTCTGAGCTGGGAATGATGCAATATTCAACCATAACGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCCGCTCGATGCACTCTGAACAAGAGCCCTGCTTGGAGTGATACACTCAAGTTACACACTGGTTATTCAGAAGAACAACTGATGAGTTGTGCTAGAGTACTAGTTAGCTTCCACTCCATGGCTGGGAATGGAAAGCTTCAGGTGGTGTACAGAAAATACTCTGATCCCAAGAGAGGGGCCGTCGCTCTGCTTCCACCGGCTAGGAATCTCCTTCCTGGCTTTGCTACTAAACAAGGCAATTGA 1483 0.4585 MASRPVVPQQAVRGEGVIGGGKQQKKNGAAEGRNRRALGDIGNLVTVKGIEVKPNRPITRSFCAQLLANAQAAAAAENNKKKACPNVVGAPPVLDGAVVTKRPVAPKGAEKKVTVKPKPEEVIEISSDKEEVKQEKCVNKKKEEGREVCGQDKEAVKQEKCVNKKKEEGNSRKKSQTLTSVLTARSKAACGLTNKPKEQIVDIDAADAGNELAAVEYIEDIYKFYKLVENESRPHDYMDSQPELNERMRAILVDWLIDVHSKFDLSLETLYLTINIIDRFLAIQTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHQQILVMEKIILGKLEWTLTVPTRYVFLVRFIKASIPDQELENMVHFLSELGMMQYSTITYCPSMVAASAVFAARCTLNKSPAWSDTLKLHTGYSEEQLMSCARVLVSFHSMAGNGKLQVVYRKYSDPKRGAVALLPPARNLLPGFATKQGN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01238 477 Gene3D - 234 345 - -
Bach8g01238 477 SUPERFAMILY Cyclin-like 346 464 IPR036915 -
Bach8g01238 477 PIRSF Cyclin_A_B_D_E 1 475 IPR046965 GO:0016538|GO:0044772
Bach8g01238 477 FunFam G2/mitotic-specific cyclin 233 341 - -
Bach8g01238 477 MobiDBLite consensus disorder prediction 1 34 - -
Bach8g01238 477 CDD CYCLIN_AtCycB-like_rpt2 347 463 - -
Bach8g01238 477 Pfam Cyclin, N-terminal domain 220 344 IPR006671 -
Bach8g01238 477 PANTHER CYCLINS 160 452 IPR039361 -
Bach8g01238 477 Gene3D - 220 460 - -
Bach8g01238 477 SMART Cyclin_C_2 347 464 IPR004367 -
Bach8g01238 477 SMART cyclin_7 351 433 IPR013763 -
Bach8g01238 477 SMART cyclin_7 254 338 IPR013763 -
Bach8g01238 477 FunFam G2/mitotic-specific cyclin-1 342 459 - -
Bach8g01238 477 CDD CYCLIN_AtCycB-like_rpt1 197 342 - -
Bach8g01238 477 SUPERFAMILY Cyclin-like 210 344 IPR036915 -
Bach8g01238 477 Pfam Cyclin, C-terminal domain 347 463 IPR004367 -
Bach8g01238 477 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01238 Bach-Chr8 8422777 8425356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01238 1 433 Core Cell Cycle Gene Families AT3G11520 54.110 1.96e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01238 K21777 - qsa:O6P43_006333 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01238 8 8422777 8425356 Bach8g01238 8 8422777 8425356 ECH