Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01181 ATGGGAGGCATCATGGACATCGAGGAGGAAAGCACTGTGGCAGTCACTTCACCAGAATCCAGTGTCACCGCTTCTGATAGCCAAAGTCTGGTTTCTCCTGTTCATGCAACTCCACCTCAGCCTGTCCAACCTATAATTCCACCAGCAATCCCACCTCCTGTTATGCCTCCCTTAGCGCCAATTCCTCCCGCCCCAGTTCTCCGCCCGCTGGCACCTCTTTCTGTCCGCCCACCAGTTATTAGGCCACCTGTGTCGCAACATGGTGAGGTATCAAGTGACTCTGATTCAGACCATGATGATTCTCTCCCTGGGGTTAACCAGGGGACAGGGGAGTATGAAATATCAGAAGAGAGTAGGCTGGTAAGAGAGCGACAGGAAAAAGCAATGCAAGAACTCATGATGAAGAGGCGTGCTGCTGCTCTAGCTGTTCCTACAAATGACATGGCAGTGCGGGCTCGACTTCGCCGTCTTGGTGAGCCCATTACACTTTTTGGTGAACGGGAGATGGAGAGAAGAGACAGGTTGCGGATGATTATGGCAAAGCTGGATGCTGAAGGTCAGCTGGAAAAGCTGATGAAAGCTCATGAGGACGAAGAAGCCGCAGCTTCTGCTCCAAAAGATGAGGTGGAGGAAGATCTGCAGTATCCCTTTTATACAGAAGGGTCAAAGGCTCTCCTGGATGCAAGAATTGATATTGCTAAGTATTCTGTAGCAAGGGCAGCATTTCGTCTTCAACGTGTCCGGAGAAAAAGAGATGATCCAGATGAAGATGAGGATGCAGAAATTGACTGGGCTTTAAAGCAGGCTGGGAATTTGTCTCTTGATATCAGTGAGATTGGAGATGACCGGCCACTTTCTGGTTGCTCAGTCTCACCAGATGGAAAAATGATTGCTACCTGTTCTCTAAGTGGAGCTTCAAAATTGTGGAGCATGCCTCAATTGACAAAGGTTTCTATCTTAAAGGGACATACTGAGCGTGCTACTGATGTTGCTTATTCTCCATTGTGCAATCATTTAGCAACTGCCTCTGCTGATCGAACTGCAAGGTATTGGCACGAAGACGGATCTCAGTTGAAGACATTTGAGGGTCATCTTGACCGTCTTGCACGTATTTCCTTCCATCCGTCAGGGAAGTACTTGGGCACAGCTAGCTTTGACAAGACATGGAGATTGTGGGACATAGAAACAGGAGAGGAGTTGCTTCTTCAAGAAGGACACAGTAGGAGTGTATATGGTTTAGCTTTCCACATTGATGGATCGTTAGCTGCATCCTGTGGACTTGATGCATTGGCTCGTGTTTGGGACCTCCGTACTGGGAGAAGTATACTTGCATTGGAAGGTCATGTTAAGCCGGTCCTTGGCATCAGCTTTTCACCTAATGGGTATCATTTAGCCACAGGTGGTGAAGATAACACTTGTCGCATTTGGGATTTAAGGAAGAAGAAATATTTGCATATCATTCCAGCTCACTCCAATTTAATATCACAAGTCAAATTTGAGCCACAAGAGGGTTACTTTTTGGTGACTGCCTCATATGACATGACTGCTAAGGTCTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACCCTATCTGGGCATGAAGCGAAAGTAACTTCTGTGGATGTTGTCACAGATGGACGTTATATTGCTACTGTCTCCCATGATAGGACTATAAAGCTGTGGTCCAGCAGAGAACAAGCTATGGACATTGATTAA 1716 0.4697 MGGIMDIEEESTVAVTSPESSVTASDSQSLVSPVHATPPQPVQPIIPPAIPPPVMPPLAPIPPAPVLRPLAPLSVRPPVIRPPVSQHGEVSSDSDSDHDDSLPGVNQGTGEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAKLDAEGQLEKLMKAHEDEEAAASAPKDEVEEDLQYPFYTEGSKALLDARIDIAKYSVARAAFRLQRVRRKRDDPDEDEDAEIDWALKQAGNLSLDISEIGDDRPLSGCSVSPDGKMIATCSLSGASKLWSMPQLTKVSILKGHTERATDVAYSPLCNHLATASADRTARYWHEDGSQLKTFEGHLDRLARISFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYGLAFHIDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKYLHIIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSVDVVTDGRYIATVSHDRTIKLWSSREQAMDID 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01181 571 ProSitePatterns Trp-Asp (WD) repeats signature. 464 478 IPR019775 -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 361 402 IPR001680 GO:0005515
Bach8g01181 571 Pfam WD domain, G-beta repeat 525 562 IPR001680 GO:0005515
Bach8g01181 571 Pfam WD domain, G-beta repeat 443 477 IPR001680 GO:0005515
Bach8g01181 571 Pfam WD domain, G-beta repeat 316 351 IPR001680 GO:0005515
Bach8g01181 571 Pfam WD domain, G-beta repeat 356 393 IPR001680 GO:0005515
Bach8g01181 571 Pfam WD domain, G-beta repeat 404 435 IPR001680 GO:0005515
Bach8g01181 571 Pfam WD domain, G-beta repeat 482 520 IPR001680 GO:0005515
Bach8g01181 571 Gene3D - 446 569 IPR015943 GO:0005515
Bach8g01181 571 Gene3D - 121 209 IPR036285 -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 487 520 - -
Bach8g01181 571 PRINTS G protein beta WD-40 repeat signature 464 478 IPR020472 -
Bach8g01181 571 PRINTS G protein beta WD-40 repeat signature 380 394 IPR020472 -
Bach8g01181 571 PRINTS G protein beta WD-40 repeat signature 549 563 IPR020472 -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 530 571 - -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 530 562 IPR001680 GO:0005515
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 361 398 - -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 445 479 - -
Bach8g01181 571 MobiDBLite consensus disorder prediction 78 120 - -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 487 529 IPR001680 GO:0005515
Bach8g01181 571 SUPERFAMILY PRP4-like 128 183 IPR036285 -
Bach8g01181 571 Coils Coil 181 201 - -
Bach8g01181 571 PANTHER WD40 REPEAT PROTEIN 101 563 - -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 320 351 - -
Bach8g01181 571 CDD WD40 284 562 - -
Bach8g01181 571 MobiDBLite consensus disorder prediction 37 55 - -
Bach8g01181 571 MobiDBLite consensus disorder prediction 13 36 - -
Bach8g01181 571 ProSitePatterns Trp-Asp (WD) repeats signature. 380 394 IPR019775 -
Bach8g01181 571 SUPERFAMILY WD40 repeat-like 279 561 IPR036322 GO:0005515
Bach8g01181 571 Pfam pre-mRNA processing factor 4 (PRP4) like 150 176 IPR014906 -
Bach8g01181 571 SMART WD40_4 438 477 IPR001680 GO:0005515
Bach8g01181 571 SMART WD40_4 354 393 IPR001680 GO:0005515
Bach8g01181 571 SMART WD40_4 523 562 IPR001680 GO:0005515
Bach8g01181 571 SMART WD40_4 396 435 IPR001680 GO:0005515
Bach8g01181 571 SMART WD40_4 269 310 IPR001680 GO:0005515
Bach8g01181 571 SMART WD40_4 313 352 IPR001680 GO:0005515
Bach8g01181 571 SMART WD40_4 480 520 IPR001680 GO:0005515
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 403 444 IPR001680 GO:0005515
Bach8g01181 571 ProSitePatterns Trp-Asp (WD) repeats signature. 422 436 IPR019775 -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 403 440 - -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 320 351 IPR001680 GO:0005515
Bach8g01181 571 MobiDBLite consensus disorder prediction 1 55 - -
Bach8g01181 571 FunFam U4/U6 small nuclear ribonucleoprotein PRP4-like protein 405 571 - -
Bach8g01181 571 ProSiteProfiles Trp-Asp (WD) repeats profile. 445 486 IPR001680 GO:0005515
Bach8g01181 571 SMART pr04_2 145 198 IPR014906 -
Bach8g01181 571 Gene3D - 263 445 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01181 Bach-Chr8 7935924 7938702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01181 423 567 U-box Gene Family AT2G33340 28.105 3.58e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01181 K12662 - gmx:100788948 848.966