Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01174 AATTACACAACTGCTTAGGTCGGGGCATCCAAGGCTAGAACCTCTCATGAGCAGAGCAACGTAGAGACGACAATGGCGAACTACGACCTAACTCCACGGATCGCGCCGAACCTGGATAGGCACCTCGTGTTCCCTCTTCTAGAGTTTCTTCAGGAACGCCAGCTCTACGAGGATGACCAGATCCTCAAGGCAAAGATTGAGCTTCTTAATAAGACCAACATGGTCGACTACGCCATGGATATCCACAAGAGCCTCTACCACACTGAAGACGTTCCTCAAGACATGATCGAAAGGAGGGCGGAGGTTGTGGCCAGGCTTAAGGCTTTGGAGGAGGCTGCAGCGCCGCTTGTTGCCTTCCTGCAAAACGCGGCTGCGGTGCAGGAATTGAGGGCTGACAAGCAGTATAATATTCAGATGCTCAAGGAAAGATACCAGATTGGTCCTGAGCAAATAGAGGCGTTGTATCAATATGCCAAATTTCAGTTTGAGTGTGGGAACTACTCTGGCGCTGCTGATTATCTTTACCAGTACAGGGCGTTATGCACAAATAGTGAAAGGAGTCTGAATGCATTATGGGGAAAGCTGGCAGCTGAGATTTTGATGCAAAATTGGGATATTGCTCTTGATGAGCTGAATCGTTTGAAGGAAATTATTGATTCAAAGAACTTTTCATCACCGTTGAATCAGGTGCAAAGCAGAATATGGTTGATGCACTGGAGTCTGTTCATCTTTTTCAACCATGACAATGGAAGAACACAGATTATTGATCTGTTTAATCAGGACAAGTATCTAAATGCCCTTCAAACCAGTGCTCCACACCTTTTACGATACTTGGCCACAGCATTCATTGTCAACAAGCGCAGGAGACCTCAATTCAAAGATTTTGTAAAAGTTATTCAACAAGAGCAACATTCATTCAATGACCCCATCACCGAGTTTTTGGCTTGCGTCTACATCAACTATGACTTTGATGGAGCACAAAAGAAGATGAAGGAGTGTGAAGAAGTAATTCTCAATGATCCCTTCCTTGGTAAACGAGCTGAAGAAGGCAACTTTTCTACCGTACCATTAAGGGATGAGTTTCTTGAAAATGCACGGCTATTTATCTTTGAGACATACTGCAGAATACACCATCGCATTGACATGGGAGTTCTTGCTGAGAAATTAAATCTGAATTATGAGGAGGCTGAGAGATGGATTGTGAATCTCATCCGTAGCTCAAAGCTTGATGCCAAAATTGATTCTAAAACCGGGACCGTCATCATGGAACCCAATCAACCAAATGTGTATGAGCAGTTGATTGACCATACCAAGGCACTTTCAGGCCGTACTTACAAATTGGTCGGTCAACTTCTGGAGCATGCACAAGCTCAAGGACAGGCTGCTCGATGA 1392 0.4468 MANYDLTPRIAPNLDRHLVFPLLEFLQERQLYEDDQILKAKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMIERRAEVVARLKALEEAAAPLVAFLQNAAAVQELRADKQYNIQMLKERYQIGPEQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLNALWGKLAAEILMQNWDIALDELNRLKEIIDSKNFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNALQTSAPHLLRYLATAFIVNKRRRPQFKDFVKVIQQEQHSFNDPITEFLACVYINYDFDGAQKKMKECEEVILNDPFLGKRAEEGNFSTVPLRDEFLENARLFIFETYCRIHHRIDMGVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSKTGTVIMEPNQPNVYEQLIDHTKALSGRTYKLVGQLLEHAQAQGQAAR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01174 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 436 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bach8g01174 439 SUPERFAMILY "Winged helix" DNA-binding domain 332 404 IPR036390 -
Bach8g01174 439 ProSiteProfiles PCI domain profile. 219 403 IPR000717 -
Bach8g01174 439 PIRSF Transl_init_eIF3e 1 439 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bach8g01174 439 Pfam eIF3 subunit 6 N terminal domain 5 137 IPR019010 -
Bach8g01174 439 Pfam PCI domain 285 399 IPR000717 -
Bach8g01174 439 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bach8g01174 439 SMART eIF3_N_2 5 137 IPR019010 -
Bach8g01174 439 CDD eIF3E 3 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Bach8g01174 439 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 332 416 IPR000717 -
Bach8g01174 439 Gene3D - 230 433 - -
Bach8g01174 439 FunFam Eukaryotic translation initiation factor 3 subunit E 228 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01174 Bach-Chr8 7872638 7875609 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01174 3 435 Eukaryotic Initiation Factors Gene Family AT3G57290 87.067 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01174 K03250 - cpap:110807170 830.861