Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01172 ATGGATCACAGAAGGCAACCGAAGGACTCTCTCTCTTACTCGAGTCTCTTCAACCTCGAGTCTTTGGTGAACTTTCAACTTCCACAACAAGATGATGATTTTGATTATTATGGGAATAGTAGTCAGGATGAGAGCAGAGATAGCCAAGTAGGTGGGGCAATTTCAAACCACAATAACCGGAATCTGCGTGGAAGGGAGTTGAATTTGTTCAAGAAAAGGAGGAGGTCTCTCAACAGTGATGACGAGGACAAGGGTATTTTGTACGAGACACACATGACAGAGGAGCGATATCGATCAATGCTAGGGGAACATATTCAGAAATATAAGAGGAGGTTTAAGGATACCTCATCTAGTCCTACCCAAAATCGAGCTGGCACTCCACTTCTGAAAAACAATACAGTTTTAAAAGCTCAAAAGGTTGGGAATGAGCCCAAGGGAGGATTACATGTTCTAGAGACTACATCTGAGTGTCTAAATGATTCAAATCCTCCAAAATCTGGAAATAACTGTGATACAGATTTCACTCTGCATTATGGAGCTGATAGGACAATGTATGAACCTGCTTCTTTGGATATTGGCAATGGTATCACTTACAAAATTCCTCCAACATATGATAAGCTGGCAGCAATACTGAATCTTCCAAGTTTCTCTGACATCCAGGTGGAGGAATTTTACTTGAAGGGTACCTTGGATTTGGGGTCCTTGGCTGCAATGATGACTGCTGATAAAAGGGTTGGGACTAGAAGCCGGGCAGGGATGGGGGAAACCTTATCCCAATATGAATCACTCCAGGCACGATTGAAGGCCATGTCTGCTTACAATTCAGCTCATAAATTCAGTCTACAAGTATCTGACATTGGTTTGAATTCCTCCATCCCAGAAGGAGCAGCTGGTAGCATAAAGCGATCCATTTTGTCTGAGGGTGGTGTATTGCAGGTTTATTATGTGAAGGTTTTGGAGAAAGGTGACACATATGAGATCATTGAACGAAGCCTACCTAAGAAGCAAAAGTTAAAAAAAGACCCTTCTATGATTGAGAAGGAGGAAATAGAAAGAATTGGGAAAGTTTGGGTAAATATTGTAAGAAGGGACATACCAAAGCACCACAGGATGTTTACAGCTTTCCACCGAAAGCAAGTCACTGATGCCAAGAGGTTCTCAGATAACTGTCAAAGAGAGGTAAGAATGAAAGTGAGTAGATCTCTTAAATTTATGAGGGGTGCTGCTATTCGAACCCGGAAACTGGCTAGAGACATGTTGCTGTTCTGGAAACGAGTTGATAAGGAGATGGCAGAAGTCAGGAAGAAGGAAGAGAAAGAAGCCGCTGAAGCTTTGAGGCGTGAACAGGAGCTTCGAGAAGCAAAGAGACAGCAGCAAAGGCTTAATTTTCTTATACAACAAACTGAACTGTATAGTCACTTTATGCAGAACAAGTCAAACTTACTGTCTTCAGAAGCATTGCCAATAGTAGATGAAAAAGCAAAAGATCAAGAGACACTGCTTGACTCTTCTGATGCTGGGCCTAGTGAGGAGGAAGATCCTGAAGAGGCTGAATTGAAGAAGGAAGCTTTGAAGGCTGCTCAAGAAGCAGTCTCAAAGCAGAGAAGTTTGACAGATGCTTTTGATAGTGAATGCTTGAGGCTTCGCCATGCTGGTGAAACTGGTACACTTCAAGAGGAAGTTGCAGGATCTAATAACATTGATTTGCAAACCCCCTCAACTATGCCAGTGGCTTCAACAGTTCAGACACCAGACCTGTTCAAAGGTTGTCTAAAAGAGTATCAGCTGAAAGGCCTTCAGTGGCTAGTTAACTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAGATGGGACTTGGAAAGACTATCCAAGCTATAGCTTTTTTAGCCCATTTGGCAGAGGAGAAAAATATATGGGGGCCTTTTTTGGTTGTTGCACCTGCATCTGTGTTACCCAATTGGGTTGACGAACTTAAACGCTTCTGCCCTGAGCTGATAAGTTTGCCTTACTGGGGTGTGGAGCGAACAGTACTTAGGAAAAGTATTAACCCAAAGGAGCTTTATCGCAGGGAAGCTAAGTTCCACGTTCTGATCACTAGCTACCAGTTACTAGTATCTGATGAAAAGTATTTTCGGCGTGTAAAATGGCAGTACATGGTATTAGATGAAGCCCAGGCAATCAAAAGTTCAAGCAGTATAAGATGGAAGACACTTCTCAGCTTCAATTGTCGGAACCGCCTACTTCTTACTGGTACACCTATTCAGAATAATATGGCAGAGTTGTGGGCTCTTCTTCATTTTATTATGCCAACTTTATTTGATAGCCATGAGCAGTTTAATGAGTGGTTTTCCAAAGGGATTGAAAACCATGCTGAGCATGGGGGTACTTTGAATGAGCACCAACTTAACAGATTGCATTCAATTCTGAAGCCTTTTATGCTGCGACGTGTTAAGAAAGATGTAGTTTCTGAGTTGACTACCAAAACAGAGGTTAAAGTGCATTGCAAGTTGAGTTCTCGACAGCAAGCCTTCTATCAAGCAGTTAAAAACAAGATATCCCTTGCTGAGTTGTTTGATGTTAATCATGATCAGATAAATGAAAAGAGAATTAGGAATTTAATGAACATCGTTATGCAACTGCGGAAGGTATGCAACCATCCAGAGTTGTTTGAAAGGAATGAGGGAAGCACATACTTTTACTTTGGAAAGATTCCATATTCCCTACGACCTCCTCCATTTGGGGAGTTGGAGAATGTTTACTATTCTGGAGGTCGCAATCCCATATCTTATGAGATGCCAAAACTACTCTACCAAGAAATTTTGCAAAATCCTGAAACACTTGGTCCGTCTATTTGTCATGGTGTCTACAGAGAATTTTTTCAGAAGCACTTTAACATTTTTAGACCAGATAATATTTATCAATCTATATTCTTGCAAGGGGACAAATCAGAGGGATCAAATGAACAGCTTGTTAAAAGTGGAACTTTTGGTTTTACCCATTTGATGGGTTTGTCTCCGCAGGAGGTGACATTTCTGGCTAATGGTTCTTTTATGGAGCTATTATTGTTTTCTATGATGAAATGGGAACAAAAATTTATCAATGGAGTTTTAGACTTTCTTATGGAGACTATAGATGACGATCCTGCATGCAGTGACCTTGATAAAGGAAAAGTGAGGGCTGTTACACGAATGTTATTAGTGCCATCAAGGTCTGAGACTAGGTTTCTTCAAAGAACATTTGCAACCAGGCCCATCCATGCTCCTTTCGAGGCATTGGTTGTCCCACATGAGGACAGGCTTCTATCCAATACAAGGCTTCTCCACTCAGCTTACACTTATATCCCTCCGACTAGAGCTCCCCCCATTGTTGCCCACTGCTCAGATAGAAACTTCTCCTATAAAATGATTGAAGAATTACACGACCCTTGGGTTATGAGGTTGCTTGTGGGATTTGCCCGCACATCTGAGTATAATGGTCCTAGAAAGCCTGATGGTCCTCCTCACTATTTAATTCAAGAGATTGACTCTGAACTACCAGTTTCACAGCCTGCTCTTCAGTTAACGTACAATATCTTTGGGTCCTCACCACCCGTGCGAAATTTTGACCTGGCAAAGTTGCTCACTGACTCTACGAAGCTTCAAACACTTGATATATTATTGAAACGCTTGTGGGCAGGAAATCACCGCATTCTCTTGTTTGTTCAGATGACTAAGATGCTGAATATTCTTGAGGACTATATGAACTACAGAAAATATAGATATTTTAGACTTGATGGATCATCTTCTATTCAGGATCGCCGGGACATGGTCAGAGACTTCCAGCGTAGGAGTGATATTTTTGTGTTCTTACTGAGTACAAGAGCTGGTGGTTTGGGTATTAACTTGACAGCTGCTGACACAGTCATATTTTATGAGAGTGATTGGAATCCAACCCTTGATTCACAGGCGATGGATAGAGCTCATCGTCTGGGTCAGACGAGAGATGTTACTGTCTACCGACTTATATGTAAGGAGACAATTGAAGAGAAGATTCTTCTCAGAGCAAGCCAAAAAAGTACCGTACAGAACCTTGTCATGACAGGTGGTTCTGTCGGTGGTGATCTTTTGGCTCCAGAGGATGTTGTATCTTTGCTTCTGGATGATGCACAGTTGGAGCAGAAACTAAAGGAAATGCCTCCACAGGGAAAAGACAAGCAAAAGAGGAAACAACCTGTGAAGGGTATACGCATAAATGAAGAAGGAGATGTATTTTTGGAAGATATAACAAACACTGGATCCCAGGGTATGGGTACTGATAATGAGCTTTCTCTAGATCCAGGGGGATCAAAGTCCAGCAGTAAGAAGAGAAAAGCTGCTTCCAACAAGCAAACTCCATCAAGAGTAAGGAATTCTGAGAAGGTAAATGGAGCTAGTACTACGCGTATGGACTATGGATTAGATGATGCCCATCTAAATACTAAGTCATTGGGGCAGAAACCTAAAAGGCCCAAGAGGCCAAAGAAGGGTGTAAATGAAAAGTTTGAAGAGTCTTTTGATGCTACATGTACCATAGTCCCTGAGCTGACTGAATTTCCACCTCCCAATACTAAAGAAGACTGA 4602 0.4174 MDHRRQPKDSLSYSSLFNLESLVNFQLPQQDDDFDYYGNSSQDESRDSQVGGAISNHNNRNLRGRELNLFKKRRRSLNSDDEDKGILYETHMTEERYRSMLGEHIQKYKRRFKDTSSSPTQNRAGTPLLKNNTVLKAQKVGNEPKGGLHVLETTSECLNDSNPPKSGNNCDTDFTLHYGADRTMYEPASLDIGNGITYKIPPTYDKLAAILNLPSFSDIQVEEFYLKGTLDLGSLAAMMTADKRVGTRSRAGMGETLSQYESLQARLKAMSAYNSAHKFSLQVSDIGLNSSIPEGAAGSIKRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKLKKDPSMIEKEEIERIGKVWVNIVRRDIPKHHRMFTAFHRKQVTDAKRFSDNCQREVRMKVSRSLKFMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKKEEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNLLSSEALPIVDEKAKDQETLLDSSDAGPSEEEDPEEAELKKEALKAAQEAVSKQRSLTDAFDSECLRLRHAGETGTLQEEVAGSNNIDLQTPSTMPVASTVQTPDLFKGCLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAIAFLAHLAEEKNIWGPFLVVAPASVLPNWVDELKRFCPELISLPYWGVERTVLRKSINPKELYRREAKFHVLITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTTKTEVKVHCKLSSRQQAFYQAVKNKISLAELFDVNHDQINEKRIRNLMNIVMQLRKVCNHPELFERNEGSTYFYFGKIPYSLRPPPFGELENVYYSGGRNPISYEMPKLLYQEILQNPETLGPSICHGVYREFFQKHFNIFRPDNIYQSIFLQGDKSEGSNEQLVKSGTFGFTHLMGLSPQEVTFLANGSFMELLLFSMMKWEQKFINGVLDFLMETIDDDPACSDLDKGKVRAVTRMLLVPSRSETRFLQRTFATRPIHAPFEALVVPHEDRLLSNTRLLHSAYTYIPPTRAPPIVAHCSDRNFSYKMIEELHDPWVMRLLVGFARTSEYNGPRKPDGPPHYLIQEIDSELPVSQPALQLTYNIFGSSPPVRNFDLAKLLTDSTKLQTLDILLKRLWAGNHRILLFVQMTKMLNILEDYMNYRKYRYFRLDGSSSIQDRRDMVRDFQRRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDSQAMDRAHRLGQTRDVTVYRLICKETIEEKILLRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDAQLEQKLKEMPPQGKDKQKRKQPVKGIRINEEGDVFLEDITNTGSQGMGTDNELSLDPGGSKSSSKKRKAASNKQTPSRVRNSEKVNGASTTRMDYGLDDAHLNTKSLGQKPKRPKRPKKGVNEKFEESFDATCTIVPELTEFPPPNTKED 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01172 1533 MobiDBLite consensus disorder prediction 1389 1509 - -
Bach8g01172 1533 Gene3D - 587 826 IPR038718 -
Bach8g01172 1533 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1216 1366 IPR001650 -
Bach8g01172 1533 MobiDBLite consensus disorder prediction 33 59 - -
Bach8g01172 1533 Pfam Helicase conserved C-terminal domain 1219 1325 IPR001650 -
Bach8g01172 1533 Gene3D - 1184 1418 IPR027417 -
Bach8g01172 1533 Gene3D - 827 896 IPR027417 -
Bach8g01172 1533 ProSiteProfiles DBINO domain profile. 356 481 IPR020838 GO:0003677
Bach8g01172 1533 SMART ultradead3 587 780 IPR014001 -
Bach8g01172 1533 CDD SF2_C_SNF 1211 1336 - -
Bach8g01172 1533 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 603 772 IPR014001 -
Bach8g01172 1533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 575 817 IPR027417 -
Bach8g01172 1533 SMART helicmild6 1242 1325 IPR001650 -
Bach8g01172 1533 Pfam SNF2-related domain 606 891 IPR000330 GO:0005524|GO:0140658
Bach8g01172 1533 MobiDBLite consensus disorder prediction 496 520 - -
Bach8g01172 1533 PANTHER HELICASE SRCAP-RELATED 68 523 - -
Bach8g01172 1533 MobiDBLite consensus disorder prediction 1389 1417 - -
Bach8g01172 1533 Coils Coil 428 467 - -
Bach8g01172 1533 MobiDBLite consensus disorder prediction 1457 1472 - -
Bach8g01172 1533 MobiDBLite consensus disorder prediction 1421 1443 - -
Bach8g01172 1533 FunFam Putative DNA helicase INO80 563 839 - -
Bach8g01172 1533 Pfam DNA-binding domain 352 480 IPR020838 GO:0003677
Bach8g01172 1533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 1386 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01172 Bach-Chr8 7853708 7865012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01172 612 891 RAD5 or RAD16-like Gene Family AT5G43530 29.268 1.02e-25 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach8g01172 SNF2_N 1.1e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01172 K11665 - gmx:100780615 2306.56