LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g01171	ATGGCGAACTACGACCTAACTCCACGGATCGCGCCGAACCTGGATAGGCACCTCGTGTTCCCTCTTCTAGAGTTTCTTCAGGAACGCCAGCTCTACGAGGATGTCCAGATCCTCAAGGCCATGATGGAGCTTCTTAATAAGACCAACATGGTCGACTACGCCATGGATATCCACAAGAGCTTCTACCACACTGAAGACGTTCCTCAAGACATGATCGAAAGGAGGGCGGAGGTTGTGGCCAGGCTTAAGGCTTTGGAAGAGGCTGCAGCGCCGCTTGTTGCCTTCCTGCAAAACGCGGCTGCGGTGCAGGAATTGAGGGCTGACAAGCAGTATAATATTCAGATGCTCAAGGAAAGATACCAGATTGGTCCTGAGCAAATAGAGGCGTTGTATCAATATGCCAAATTTCAGTTTGAGTGTGGGAACTACTCTGGCGCTGCTGATTATCTTTACCAGTACAGGGCGTTATGCACAAATAGTGAAAGGAGTCTGAGTGCATTATGGGGAAAGCTGGCAGCTGAGATTTTGATGCAAAATTGGGATATTGCTCTTGATGAGCTGAATCGTTTGAAGGAAATTATTGATTCAAAGAACTTTTCATCACCGTTGAATCAGGTGCAAAGCAGAATACGGTTGATGCACTGGTGTCTGTTCATCTTTTTCAACCATGACAATGGAAGAACACAGATTATTGATCTGTTTAATCAGGACAAATATCTAAATGCCCTTCAAACCAGTGCTCCACACCTTTTACGATATTTGGCCACAGCATTCATTGTCAACAAGCGCAGGAGGCCTCAATTCAAAGATTTTGTAAAAGTTATTCAACAAGAGCAACATTCATTCAATGACCCCATCACCGAGTTTTTGGCTTGCGTCTACATCAACTATGACTTTGATGGAGCACAAAAGAAGATGAAGGAGTGTGAAGAAGTAATTCTCAATGATCCCTTCCTTGGTAAACGAGCTGAAGAAGGCAACTTTTCTACCGTACCATTAAGGGATGAGTTTCTTGAAAATGCACGGCTATTTATCTTTGAGACATACTGCAGAATACACCATCGCATTGACATGGGATCAGCAGAGAACGGAGCAGACTGCGACACTCCTCAGTCCTGTTCTGGAGTGGCAAGAGAGAAACAGCAGAAGGAAAAAGAAAAGATGGATACAAAACCCACAGAGATTAGCAGCTCTAAGATGTTTGGAGGTTACAACAAGAGGTACAAGCATTTTAGCCCGACGCTAGGTTGCTCCATGACTTTCTACGTCTATTTCCCACCTTCTCCTTCTCCATCGCACAAATTCCCTGTACTCTACTGGTTGTCTGGTCTCACCTGCACTGATGAGAATTTTATAATTAAGTCTGGAGCTCAACGTGTAGCTTCAAATGAGGGTATTGCTTTGGTTGCCCCTGATACATCTCCAAGAGGACTAAATGTGGAAGGAGAGGCAGACAGCTGGGACTTTGGTGTAGGTGCTGGATTTTATGTCAATGCTACACAAGAGAAGTGGAAGAATTGGCGCATGTATGACTATGTTGTGAAAGAGTTACCAGAGCTTCTAAGTAATGACTTTCCACAGCTTGAAACGTCCAAAGCTTCCATATTTGGTCATTCTATGGGTGGTCATGGTGCCCTAATAATCTACCTTAAAAATCTGGATAAATATAAGTCGGTTTCTGCCTTTGCACCAGTCGCAAATCCTATAAATTGTGCTTGGGGGCAGAAGGCTTTTACAAATTATCTAGGTGGCAATAAATCCGATTGGGAGGAGTATGATGCCACTCTTCTGGTTACAAAGTCCCGTAATGTATCTGCCACAATTTTGATTGATCAGGGGGAAGATGACAAATTTTTGTCTGATCAATTGCTGCCTCACAAATTTGAAGAGGCTTGCAGAAATGCCAACGTTCCGTTCCTCTTGCGTTTTCAACCTGGTTATGATCACTCTTACTATTTTATTGCTACCTTCATAGACGATCACATCCGGCATCATGCTCAAGCTCTTAGGCTTGGTTAA	2019	0.4393	MANYDLTPRIAPNLDRHLVFPLLEFLQERQLYEDVQILKAMMELLNKTNMVDYAMDIHKSFYHTEDVPQDMIERRAEVVARLKALEEAAAPLVAFLQNAAAVQELRADKQYNIQMLKERYQIGPEQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALDELNRLKEIIDSKNFSSPLNQVQSRIRLMHWCLFIFFNHDNGRTQIIDLFNQDKYLNALQTSAPHLLRYLATAFIVNKRRRPQFKDFVKVIQQEQHSFNDPITEFLACVYINYDFDGAQKKMKECEEVILNDPFLGKRAEEGNFSTVPLRDEFLENARLFIFETYCRIHHRIDMGSAENGADCDTPQSCSGVAREKQQKEKEKMDTKPTEISSSKMFGGYNKRYKHFSPTLGCSMTFYVYFPPSPSPSHKFPVLYWLSGLTCTDENFIIKSGAQRVASNEGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYVNATQEKWKNWRMYDYVVKELPELLSNDFPQLETSKASIFGHSMGGHGALIIYLKNLDKYKSVSAFAPVANPINCAWGQKAFTNYLGGNKSDWEEYDATLLVTKSRNVSATILIDQGEDDKFLSDQLLPHKFEEACRNANVPFLLRFQPGYDHSYYFIATFIDDHIRHHAQALRLG	672

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g01171	672	NCBIfam	S-formylglutathione hydrolase	395	669	IPR014186	GO:0018738\|GO:0046294
	Bach8g01171	672	MobiDBLite	consensus disorder prediction	372	394	-	-
	Bach8g01171	672	SMART	eIF3_N_2	5	137	IPR019010	-
	Bach8g01171	672	Pfam	eIF3 subunit 6 N terminal domain	5	137	IPR019010	-
	Bach8g01171	672	MobiDBLite	consensus disorder prediction	378	393	-	-
	Bach8g01171	672	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E	1	360	IPR016650	GO:0003743\|GO:0005737\|GO:0005852
	Bach8g01171	672	Pfam	Putative esterase	412	663	IPR000801	-
	Bach8g01171	672	SUPERFAMILY	alpha/beta-Hydrolases	395	669	IPR029058	-
	Bach8g01171	672	FunFam	S-formylglutathione hydrolase	392	671	-	-
	Bach8g01171	672	CDD	eIF3E	3	359	IPR016650	GO:0003743\|GO:0005737\|GO:0005852
	Bach8g01171	672	Hamap	Eukaryotic translation initiation factor 3 subunit E [EIF3E].	2	406	IPR016650	GO:0003743\|GO:0005737\|GO:0005852
	Bach8g01171	672	Gene3D	alpha/beta hydrolase	393	672	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g01171	Bach-Chr8	7839661	7851847	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g01171	3	359	Eukaryotic Initiation Factors Gene Family	AT3G57290	86.275	0.0	660

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g01171	K03250		-	cpap:110807170	679.478