Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01136 TTCATTTTATGTTTTCCTTGTTTTCTGCTGATTATTTGATCAGCTTATGCTGTCAATCCTCAAAATTGTTCTTCGCAGGCTGGTGGCAAATCGAGCTATATTTATTATAAATTAATTTCCACTCTCAATTTGAAGCATGAAACTGAAATTGGAGGGGACACAACATTCAGAACCGGCTATAAGTAGCAAAAACCTACCTGCAACTTGTTATCAAGCTTGGTGGCATGGCGTAAGGCAGGAGGCCTTGTCTAGAGACATGACTGGGGAAGGCAAAACAATTTCATTTGTGCCAAATTCTTTGGATGGTAGTTTTGGGACCCAATCCAACAAATTACAGGCTAAGGCTGCTCTGGATGAAGAGAAGGGGACCAAAGGAAAAGCAGAAGGAGAAACAGTTGAAAAACATCAACAAAGGCAACCTGCTATCCCTAGTACGCCTCCAACAGTAAATGAATTTCTTGTGCCGCCTTCACAGTTGGAGCTTGTCGGTCACTCTGTGTCTATGGCATGCTCATCTTACCCATATTCAGATCCATGTTATGGAGGAGCAATCCCTACTCATGGAGCTCATTCTATGGTACCTCCTCACAGTCTAGGTTTACATGCCGCCCAAATGGTCTTACCACTGGAAATGGCAGAAGAACCTGTTTACGTCAATGCCAAGCAATACCATGGAATTTTGAGGCGTAGGCAATTGCGTGCTAAGGCTGAATTGAACAATAAGCTGACAAGAGCGAGGAAGCCCTACCTTCATGAATCGCGCCATTTGCATGCTGTGAGAAGAGCAAGAGGCTGTGGAGGCCGTTTTGTGACCACAAAGAAACTTGATACTAGTGCTGCAAACACTGCAATCAATAAGGAAACTCCCTACCTTCATGAATCGCGCCATTTGCATGCTGTGAGAAGAGCAAGAGGCTGTGGAGGCCGTTTTGTGACCACAAAGAAACTTGATACTAGTGCTGCAAACACTGCAATCAATAAGGAAACTGTTAGTTCTGACCATAAAACCGTGTCTTCCAACTCCAGTGGCATTGCTGATTTAACCTCCACGTCTCATCTACAGGAAATGCATCACTCCAGTTCAGACTACTCACAGGTTCAGGGATTTGTGCTGTCTGGTTATCAATCTTTCTCAGGTGACCCTAGAAATGGAGGAGACTTATCTGGGCAGCGGTCTGAAAGCCTTAACTTCACTGGGGATTCCAGGGCCCTCACCATAAAATAACCAAATGTTTGAGAAGTTGCTCAACTCAACCAACACTTCTAAGATGGCTTCCTTCTGTTAATATTTTTTTTTATATCAGCTACTGGCCCAGTTTAATGCTTATGCTTCTGCATCAAGTGCTTTCTGGCAACCGAACCTGGAAAAGGAAACCTGGTGTACTACATGTTAGGTCTTCGGGCAAATCATTCTTGGCTTGGCTCTTCTTTTATCCTCTTACATGTCATTTAACCTTTTTGATGGGTCTGTAAAACTAAAAGCAATTATGAATTGTAGCACAATCACTCGTTCATTGGCCTTTTTGTAGAATAATAGAAGAGGAAATTTGAAGCA 1555 0.4302 MKLKLEGTQHSEPAISSKNLPATCYQAWWHGVRQEALSRDMTGEGKTISFVPNSLDGSFGTQSNKLQAKAALDEEKGTKGKAEGETVEKHQQRQPAIPSTPPTVNEFLVPPSQLELVGHSVSMACSSYPYSDPCYGGAIPTHGAHSMVPPHSLGLHAAQMVLPLEMAEEPVYVNAKQYHGILRRRQLRAKAELNNKLTRARKPYLHESRHLHAVRRARGCGGRFVTTKKLDTSAANTAINKETEMHHSSSDYSQVQGFVLSGYQSFSGDPRNGGDLSGQRSESLNFTGDSRALTIK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01136 296 Gene3D - 167 228 - -
Bach8g01136 296 PRINTS CCAAT-binding transcription factor subunit B signature 170 192 IPR001289 GO:0003700|GO:0006355
Bach8g01136 296 PRINTS CCAAT-binding transcription factor subunit B signature 201 224 IPR001289 GO:0003700|GO:0006355
Bach8g01136 296 MobiDBLite consensus disorder prediction 269 296 - -
Bach8g01136 296 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 53 257 IPR001289 GO:0003700|GO:0006355
Bach8g01136 296 SMART cbf3 166 227 IPR001289 GO:0003700|GO:0006355
Bach8g01136 296 MobiDBLite consensus disorder prediction 70 102 - -
Bach8g01136 296 ProSitePatterns NF-YA/HAP2 subunit signature. 172 192 IPR018362 GO:0003677|GO:0016602
Bach8g01136 296 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 169 224 IPR001289 GO:0003700|GO:0006355
Bach8g01136 296 MobiDBLite consensus disorder prediction 70 90 - -
Bach8g01136 296 ProSiteProfiles NF-YA/HAP2 family profile. 167 227 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01136 Bach-Chr8 7588166 7592268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01136 110 296 CCAAT-HAP2 Transcription Factor Family AT3G20910 46.734 5.29e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach8g01136 CBFB_NFYA 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01136 K08064 - qsa:O6P43_006531 261.151