Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01101 ATGGGTTCAAGCTCTGCGACCAAATCAGGAGCTGCTTCCTCCTCGCCGCCCGAACCCTCCATTGAGTCCCTCAATGGGTTGAAATTCGGGCAAAAAATCTACTTTGAGGATGTGGGTCTCGGAGCTCCGACCAAATCCAGTGGCGGAGCTTCGTCGTCCTCTGAGGCAACCCCCACAAAGAAGGGAAGGGGCGGCGCTGTACAGGCCACACAGCCTCCTAGGTGTCAGGTTGAGGGCTGTAGAGCAGATCTGAGTGATGCTAAGGCTTACTATTCTAGGCATAAAGTCTGCGGCATGCACTCGAAATCCTCTAAGGTAATTGTCGCTGGTCTGGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATTTGCTTCCTGAGTTTGATCAAGAAAAACGAAGTTGCCGCAGGCGACTAGCTGGCCATAATGAACGTCGGAGAAAGCCTCCACCAAACTCCTTATTGGCCTCTCACTATGGCCGACTTTCTTCCTCTGTTTTGGAAAACAGCAGCAGAGGTGGTAACTTTCTAATGGAATTTGCTGCATACCCAAAGCTTAATATGAGGAATACACTGCCAACTCCGAGATCATCTGTGCAGGTTCCTGGAAATCAAACCACTACACTTTCCTGGCAGGGAAACTTGGAGATGCCATCTGACATCTTCTTGCAAGGTTCAGTTGGCGGGACGGGTTTCACTGGTCCCAGAAATCCACCAGGAGAAAGCTTTACAGGAACCACAGACTCAAGTTGTGCTCTCTCTCTTCTGTCAAATGAAACATGGAGCCCCAGAAACAGAGCACCAAACATTGGGGTGAACAACTTCATAAATGTCACCGGGACACCCATGACACAACTCGCTGCATCTTCTCATGGCAGCTCCATTCATCAATTTCCAAGTGCATCGTGGTGTTTCAAGGGCATTGATGCTAGTGATTGCCCGGACGAGGTTGCCCCTCATCTCGGTCTAGGTCAAATTTCGCAGCCTCCAACTAGTCAGTTTCCTAGTGAGCTTGACTTGTCACAACAGAGTAGGAGGGATTATATGGAACTTGAGCAGTCCAGTGCATACGAGTCTTCTCAGCATATAAATTGGTCACTTTAA 1104 0.4918 MGSSSATKSGAASSSPPEPSIESLNGLKFGQKIYFEDVGLGAPTKSSGGASSSSEATPTKKGRGGAVQATQPPRCQVEGCRADLSDAKAYYSRHKVCGMHSKSSKVIVAGLEQRFCQQCSRFHLLPEFDQEKRSCRRRLAGHNERRRKPPPNSLLASHYGRLSSSVLENSSRGGNFLMEFAAYPKLNMRNTLPTPRSSVQVPGNQTTTLSWQGNLEMPSDIFLQGSVGGTGFTGPRNPPGESFTGTTDSSCALSLLSNETWSPRNRAPNIGVNNFINVTGTPMTQLAASSHGSSIHQFPSASWCFKGIDASDCPDEVAPHLGLGQISQPPTSQFPSELDLSQQSRRDYMELEQSSAYESSQHINWSL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01101 367 MobiDBLite consensus disorder prediction 1 21 - -
Bach8g01101 367 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Bach8g01101 367 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Bach8g01101 367 MobiDBLite consensus disorder prediction 45 59 - -
Bach8g01101 367 Gene3D - 65 136 IPR036893 GO:0003677|GO:0005634
Bach8g01101 367 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Bach8g01101 367 MobiDBLite consensus disorder prediction 42 72 - -
Bach8g01101 367 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 301 IPR044817 GO:0003677
Bach8g01101 367 Pfam SBP domain 75 148 IPR004333 GO:0003677
Bach8g01101 367 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01101 Bach-Chr8 7345162 7348663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01101 27 367 SBP-box Gene Family AT2G42200 47.814 9.85e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach8g01101 SBP 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01101 - - gmx:100807165 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01101 8 7345162 7348663 Bach1g02216 1 34278276 34281824 BWGD
Bach8g01101 8 7345162 7348663 Bach8g01101 8 7345162 7348663 ECH