Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01098 GGAGAACCAACAGCAATGGAGGATTTGAAAAAGAGAAAGCTAGAAGAGGCTGGGAACGGTGACTTTTCTTCGAAGGAAGAGCTTCGCTTGCTTCTTGACCCGCTAGCAAAGCCCCAGCTCGTCGATCTTCTCTCAAAATTAGGGTCCCAATATCCTTCAATTGCAGAAGAAATAAAAAATCTTGCGAGTGCAGATCCTGTCCATCGAAAGCTTTTTGTTCGTGGCTTGGCATGGAATACCACTTCAGAAACATTGTGTGCTGCATTTCAAGAACATGGAGAGATTGAGGAAGGTGCTGTGATCTATGATAAAACAACAGGAAGGTCCCGTGGATATGGTTTCATCACTTACAAACATATGGAGTCAACACACCTTGCATTGAGAGCACCTGGCAAGTTAATTGATGGCAGAATGGCTGTCTGTAATCTAGCTTGTGAGGGCCTAACTGGTGCAAGTACTGTGCCAGATCTTTCCCTGAGGAAGCTGTACATTGGTAGCTTATCCCCAGAAGTCACTAGTGAAGTGTTACTCCACTTTTTTGGGAGGCATGGTGAAATAGAGGAAGGTTCAGTTGCCTATGACAAAGATACAAATGAATCTCGCGGTTTTGGCTTTGTTACGTACAAGACAGCAGAAGGTGCAAAGAAGGCTATAGATGATCCAGAAAAGACTCTTGGGGGGAGGAATATAATTGTAAAATATGCTGATTCGCACAAGAATAAAACAGGTCAGCCACCATTAACCGGAGGAGTGATTCCAATGCCAGCCCTACCCATGGCCCCTGGACATATGCAGCCTGGAAGATCTCATATCGGTACTCCTCCTGTTGGCTACGCTTACCCTCAAACTGTTTCCCCATACCCTTCGGTTTCTTATCCTAGCCCTCCCACTGCACCTGCTCCTTATCCAATGCAAGGACAAGTTTCTTATCCCCCAGTTCCTGTGAAGAAAGATCCACTTGGGCTCCCACCAGCTCCATCTGTGGGAATGAGCAACTACCCGTATTACTATCCTAAGCAATAGCAAGACGATACCGATTCTCCTGTTGAGCCTCTTTTTACACGTGTATTTATCTCTCTTTCTTAGAATGTGTAGAATAGTTTAGTGACAATGGATGTTGGATCTTGTAGATGTCATTGCAAAATGAACTCATGTTTTAGTGTTCTTTGTAGAATATTTACTTTCTTATTTGTTTGTG 1198 0.4407 MEDLKKRKLEEAGNGDFSSKEELRLLLDPLAKPQLVDLLSKLGSQYPSIAEEIKNLASADPVHRKLFVRGLAWNTTSETLCAAFQEHGEIEEGAVIYDKTTGRSRGYGFITYKHMESTHLALRAPGKLIDGRMAVCNLACEGLTGASTVPDLSLRKLYIGSLSPEVTSEVLLHFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTAEGAKKAIDDPEKTLGGRNIIVKYADSHKNKTGQPPLTGGVIPMPALPMAPGHMQPGRSHIGTPPVGYAYPQTVSPYPSVSYPSPPTAPAPYPMQGQVSYPPVPVKKDPLGLPPAPSVGMSNYPYYYPKQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01098 335 SUPERFAMILY RNA-binding domain, RBD 151 247 IPR035979 GO:0003676
Bach8g01098 335 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 58 132 - -
Bach8g01098 335 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 155 232 IPR000504 GO:0003723
Bach8g01098 335 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 64 141 IPR000504 GO:0003723
Bach8g01098 335 CDD RRM2_NsCP33_like 156 230 - -
Bach8g01098 335 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 132 IPR000504 GO:0003723
Bach8g01098 335 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 157 225 IPR000504 GO:0003723
Bach8g01098 335 SMART rrm1_1 156 228 IPR000504 GO:0003723
Bach8g01098 335 SMART rrm1_1 65 137 IPR000504 GO:0003723
Bach8g01098 335 Gene3D - 148 246 IPR012677 -
Bach8g01098 335 Gene3D - 41 147 IPR012677 -
Bach8g01098 335 SUPERFAMILY RNA-binding domain, RBD 52 141 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01098 Bach-Chr8 7321192 7324514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01098 147 266 C2H2 Transcription Factor Family AT2G19380 32.283 6.86e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01098 K12741 - gmx:100776344 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01098 8 7321192 7324514 Bach8g01098 8 7321192 7324514 ECH