Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01092 TTTTCGTTTTCCCCGACCTCCCAGGGAATGAACTCAAATAATTAACTGCTTTGAAACCCTAATTTTTTCCCCGTTTATATGCACGTATATGATCAAATAGTCGTTTATTGATTTTTCTCTGCGCGATATTCGTTCTCTTTTCAGCTCCTTCTCTTTCAAAACCTTCTACTAGGGTTGCCAATAGGGTTTTTACGCTTTCTAGAAGTTATACTTCTTCTATCACTTTTCTTCTAGTCTCGTTTGGATCTCTCTGTAATTTCAGTTTTTTCTCCGCGGTTTTTCTTGCAGTCTGTTTGTTTCCCCTTCTTCTGAAGTTATTCTTTTATTGGAGCTTGATCTATTTCGTAGTAAAATGGATACGCGCAAGAGAGAGACGCCTGATTCTCTCTTCAACGTTAACGGCGGCCTCAAGAAGCCTAAGCAAGAAATGGAGTTCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGTACCAAGTTTTTCAGCACCGCTGGTTGCCCATTTGGTGAGGGCTGTCACTTCCTGCACTATGTACCTGGTGGTTATAATGCTGTTGCCCGGATGATGAATCTAGCGCCTGCTGTTCCTCCAGCATCTAGAAATATTGCTGCTCCACCACCAGTTCCTAATGGACCCACACCACCTACTGTTAAAACCCGCATATGCAACAGGTTTAATAGTGCTGAAGGCTGCAAATTTGGTGACAAATGCCATTTTGCACATGGTGAATGGGAACTTGGCAAGCCTATGGGTCCATCAGTTGATGATCATCGTGCCATGGGATCTGGACCTATTTCTGGCCGTATAACTGGTCGACTGGAGCCTCCTCCCGGTCCTGCCAGTAGTTTTGGTGCCAATGCCACTGCCAAGATTAGTGTAGAAGCTTCCCTGGCTGGAGCAATCATTGGGAAGGGTGGTGTGAACTCCAAGCAGATCTGTCGCCAAACAGGAGCCAAACTATCAATTCGGGAGCATGAATCAGATCCAAGTCTTAGAAATATTGAACTTGAAGGAACTTTTGAACAGATTAAGGAAGCGAGTAACATGGTACAAGAATTAATTTCAACTGTCTCAATGTCCATGAATCCTAAAGCACCTGGTGCTCCAGCCTCTCGTGGAAGTAACTATAAGACCAAGCTGTGTGAGAAATTTGCGAAAGGATCTTGTACCTTTGGAGAAAGATGTCACTTCGCACATGGGGCTGGTGAATTGCGAAATTCAGGAGTATGAGCTTACCGATTTAGGTTCATTTTATTTTGTCATCTTATATTAGCTAGAGCTTTTTTTATCGATGTGCATTCCAACCTAGTGTTACTGATAGGACTTCTTGTATGAAAATTTTATTTTAGTTTCTTTTCAAAG 1363 0.4263 MDTRKRETPDSLFNVNGGLKKPKQEMEFLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHYVPGGYNAVARMMNLAPAVPPASRNIAAPPPVPNGPTPPTVKTRICNRFNSAEGCKFGDKCHFAHGEWELGKPMGPSVDDHRAMGSGPISGRITGRLEPPPGPASSFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPSLRNIELEGTFEQIKEASNMVQELISTVSMSMNPKAPGAPASRGSNYKTKLCEKFAKGSCTFGERCHFAHGAGELRNSGV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01092 292 ProSiteProfiles Type-1 KH domain profile. 169 233 - -
Bach8g01092 292 SUPERFAMILY CCCH zinc finger 257 288 IPR036855 GO:0046872
Bach8g01092 292 CDD KH-I_AtC3H36_like 172 237 - -
Bach8g01092 292 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 159 239 IPR036612 GO:0003723
Bach8g01092 292 SMART kh_6 168 238 IPR004087 GO:0003676
Bach8g01092 292 SMART c3hfinal6 258 284 IPR000571 GO:0046872
Bach8g01092 292 SMART c3hfinal6 99 126 IPR000571 GO:0046872
Bach8g01092 292 SMART c3hfinal6 34 61 IPR000571 GO:0046872
Bach8g01092 292 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 101 126 IPR000571 GO:0046872
Bach8g01092 292 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 259 283 IPR000571 GO:0046872
Bach8g01092 292 Pfam RNA-binding, Nab2-type zinc finger 39 59 - -
Bach8g01092 292 ProSiteProfiles Zinc finger C3H1-type profile. 34 62 IPR000571 GO:0046872
Bach8g01092 292 SUPERFAMILY CCCH zinc finger 35 60 IPR036855 GO:0046872
Bach8g01092 292 ProSiteProfiles Zinc finger C3H1-type profile. 258 285 IPR000571 GO:0046872
Bach8g01092 292 FunFam Zinc finger CCCH domain-containing protein 94 131 - -
Bach8g01092 292 FunFam Zinc finger CCCH domain-containing protein 253 289 - -
Bach8g01092 292 Gene3D - 95 131 - -
Bach8g01092 292 Gene3D - 252 290 - -
Bach8g01092 292 Pfam KH domain 172 235 IPR004088 GO:0003723
Bach8g01092 292 PANTHER CCCH ZINC FINGER/TIS11-RELATED 27 153 IPR045877 GO:0003729
Bach8g01092 292 Gene3D K Homology domain, type 1 169 240 IPR036612 GO:0003723
Bach8g01092 292 SUPERFAMILY CCCH zinc finger 97 130 IPR036855 GO:0046872
Bach8g01092 292 ProSiteProfiles Zinc finger C3H1-type profile. 99 127 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01092 Bach-Chr8 7260886 7265384 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach8g01092 KH_1 4.8e-12 CL0007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01092 - - gmx:100803981 490.73