Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01079 CTCTTTCTCTCTCTTTCCAGAGAGCGCGAGGCGTCTGACTTGCGTTGCGTGCGATTCATTTTGGACACTCATCTAAACCCTCTCTTCTTCTTTCTTCTCACTAGATCCTCACCACGGGAACTCAATCATGGTCGACTTTACTCGGCCCTAGCTCGACTCAGCTCTCTTCTCCATCCCTCCCAGTAATTGTAGTAAGGTTGAGCTCATCTTCAACAACGACCTTCGCATCTGACAACCCAGGTCTTCTATCTTCTTTTACTTCTCTTGTTTTTCGTTTTCCCTTTTTGATATCCTTCTCTCTTTCCCCAATAAAAAAGTCCATGTTTTTCAAAGTATATGTGATTCCCATCCTTGTAATTGTTGAACAGATATTGGGGACGTTTGAGCATAGCTTCTGTTCCCAATCAAAGATTAATAACCACCCAGAATTATTTATTGGAATTCAGGAAATTCTGCATGGGTTTCGTTCTGATTGTTGTTAACCTACCGGGTTGGATCTTAGTTCGTCCATGTTCGTGATTAGATTGAAGTTAGGGTTTATGAACAATCCTGTCGCCAATTTAGGGTATTGTCATTAATGAAACCTCAATAAATCTCATACATTCGTCATTTTGTTCCTTCAGCATTGTAATAAAGTGGGGATCTTTTCACATTGGATTTTCTTAAAATATGAGGTGAAGCAGTCTTCTGATTTCCTTTTTGTCAGTTTTCTTCCTCCTACTATTGGTTTGTTAAAGTCTGCGAGTAAAGTGAGCCTCTTTCTAGTTTGATATTTCAACTTGTGATGGAGGAAGCGACACCGGATGCAATGAACCTTGATTTGAATCTCGGTCCTGGTCCAGAGCCGGCAGCGAGCTCCATAACTAATGAACCTGCGAACTTGGATGACTGGATTGGTGAGCCTCTCCATAGAATTAGCGAAGCTGTTCGGCTTAGGGCTCGACAACGGTGGAGATGGCGGCATATCCCACCTGAAGCCCGCAATATCTCAATGGAGTTAAATCAATTTTTGGTCAACCCAGGTAATGGAGATGCATTACAGGCCGGCGAAGGTAGTGTGGCAGCTGAGCAAAGAACAGAGGATGTGCCAAAAGCATGTGACAATAACAATGGTGTTACAGAAGATAAGACATCAGAGAAGAAGGATGATATTGAAAAGAGTAGTGGCAGCGACGGGAGCTTTTTCGATTGTAATATTTGTTTAGACCTGGCCAGGGATCCTGTTGTCACTTGTTGTGGTCATTTGTTTTGTTGGTCATGCCTCTATCGATGGCTACATCTGCATTCAGATGCTAAGGAATGTCCAATTTGCAAGGGAGAAGTGACAATTAAAACTGTTACCCCAATATATGGTCGGGGAAGCAATGTTCCTGATCCAGAGGAAGACCTAACTCTTAAAATTCCTCTTAGGCCTAACGCAAGGCGTGTTGAGGGTCTCAGACAAACCATTCAAAGAAATGCATTCCCAGTGGAGGAGATGATTCGCCGCATTGGAAGTAGAATTGATCTTACTAGGGATTTAGTTCAGCCACATGAAACCGACCATGCACGTGAAACAGCAGAGAGAACTAGTTCCTTGCTAAATAGGTTTTTGACATCTCGAGGAATAAGGAGAGAGCATAATCCTGGGCCCCCAGACGATGTAGTTGATTTAACACAAAACAGCGTTGTTAGCACTGAAGCAGGAGATACCCGCAGGGTCCAACCTTCTATGTTTCGAAGAGCACATTTGCATAGATCAACATTTTCTTCTCTTTCAACTGCGCTGAATAATGCTGAAAGGTTAGTTGAGGCATATTTCCGTAGCCATCCCATTGGTAGAAACCAAGAACAACCTCCACCGGTCGATGACAGAGATTCCTTTTCAAGCATTGCTGCTGTCATAAATTCAGAGAGTCAAGTGGACAATGCTATAGAAATTGATTCCATGGTGTCCTCTTTGTCAACATCCTCTTCCAGGAGGAGAAATGATGCTTCAAGAGTTTCTGATGTGGATAGTGGAGATTCTCGTGCCCCAAGGCGGAGGCGGTTGAATTGAATGGAGGAAGCGACACCGGATGCAATGAACCTTGATTTGAATCTCGGTCCTGGTCCAGAGCCGGCAGCGAGCTCCATAACTAATGAACCTGCGAACTTGGATGACTGGATTGGTGAGCCTCTCCATAGAATTAGCGAAGCTGTTCGGCTTAGGGCTCGACAACGGTGGAGATGGCGGCATATCCCACCTGAAGCCCGCAATATCTCAATGGAGTTAAATCAATTTTTGGTCAACCCAGGTAATGGAGATGCATTACAGGCCGGCGAAGGTAGTGTGGCAGCTGAGCAAAGAACAGAGGATGTGCCAAAAGCATGTGACAATAACAATGGTGTTACAGAAGATAAGACATCAGAGAAGAAGGATGATATTGAAAAGAGTAGTGGCAGCGACGGGAGCTTTTTCGATTGTAATATTTGTTTAGACCTGGCCAGGGATCCTGTTGTCACTTGTTGTGGTCATTTGTTTTGTTGGTCATGCCTCTATCGATGGCTACATCTGCATTCAGATGCTAAGGAATGTCCAATTTGCAAGGGAGAAGTGACAATTAAAACTGTTACCCCAATATATGGTCGGGGAAGCAATGTTCCTGATCCAGAGGAAGACCTAACTCTTAAAATTCCTCTTAGGCCTAACGCAAGGCGTGTTGAGGGTCTCAGACAAACCATTCAAAGAAATGCATTCCCAGTGGAGGAGATGATTCGCCGCATTGGAAGTAGAATTGATCTTACTAGGGATTTAGTTCAGCCACATGAAACCGACCATGCACGTGAAACAGCAGAGAGAACTAGTTCCTTGCTAAATAGGTTTTTGACATCTCGAGGAATAAGGAGAGAGCATAATCCTGGGCCCCCAGACGATGTAGTTGATTTAACACAAAACAGCGTTGTTAGCACTGAAGCAGGAGATACCCGCAGGGTCCAACCTTCTATGTTTCGAAGAGCACATTTGCATAGATCAACATTTTCTTCTCTTTCAACTGCGCTGAATAATGCTGAAAGGTTAGTTGAGGCATATTTCCGTAGCCATCCCATTGGTAGAAACCAAGAACAACCTCCACCGGTCGATGACAGAGATTCCTTTTCAAGCATTGCTGCTGTCATAAATTCAGAGAGTCAAGTGGACAATGCTATAGAAATTGATTCCATGGTGTCCTCTTTGTCAACATCCTCTTCCAGGAGGAGAAATGATGCTTCAAGAGTTTCTGATGTGGATAGTGGAGATTCTCGTGCCCCAAGGCGGAGGCGGTTGAATTGATAGAAGTCTTTTTTATTACAGTGGTATCCTGTAAAACACAAAATTATAATATTCCAACAGCTATGTAAGTGCTACTTGCCTTTATATGGCTT 3384 0.4374 MEEATPDAMNLDLNLGPGPEPAASSITNEPANLDDWIGEPLHRISEAVRLRARQRWRWRHIPPEARNISMELNQFLVNPGNGDALQAGEGSVAAEQRTEDVPKACDNNNGVTEDKTSEKKDDIEKSSGSDGSFFDCNICLDLARDPVVTCCGHLFCWSCLYRWLHLHSDAKECPICKGEVTIKTVTPIYGRGSNVPDPEEDLTLKIPLRPNARRVEGLRQTIQRNAFPVEEMIRRIGSRIDLTRDLVQPHETDHARETAERTSSLLNRFLTSRGIRREHNPGPPDDVVDLTQNSVVSTEAGDTRRVQPSMFRRAHLHRSTFSSLSTALNNAERLVEAYFRSHPIGRNQEQPPPVDDRDSFSSIAAVINSESQVDNAIEIDSMVSSLSTSSSRRRNDASRVSDVDSGDSRAPRRRRLN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01079 417 FunFam E3 ubiquitin-protein ligase RMA3 104 225 - -
Bach8g01079 417 Pfam Zinc finger, C3HC4 type (RING finger) 136 176 - -
Bach8g01079 417 CDD RING-HC_AtRMA-like 134 177 - -
Bach8g01079 417 ProSitePatterns Zinc finger RING-type signature. 151 160 IPR017907 -
Bach8g01079 417 SUPERFAMILY RING/U-box 132 189 - -
Bach8g01079 417 SMART ring_2 136 176 IPR001841 -
Bach8g01079 417 MobiDBLite consensus disorder prediction 384 417 - -
Bach8g01079 417 ProSiteProfiles Zinc finger RING-type profile. 136 177 IPR001841 -
Bach8g01079 417 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 108 318 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach8g01079 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 260 IPR013083 -
Bach8g01079 417 MobiDBLite consensus disorder prediction 112 128 - -
Bach8g01079 417 MobiDBLite consensus disorder prediction 86 128 - -
Bach8g01079 417 MobiDBLite consensus disorder prediction 395 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01079 Bach-Chr8 7176691 7178820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01079 1 408 C3H Transcription Factor Family AT3G58030 52.995 7.74e-134 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01079 K10666 - gmx:100811099 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01079 8 7176691 7178820 Bach8g01079 8 7176691 7178820 ECH