Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01078 ATGGAGCTGGCATTGAGCTTAGGGGATTCATCGAAAGCCTTCTCTTTTCTAGACAAGCCAATAAAAATGCCCAACAAAGATCCTAACCCTGGCTTCTGCATAGCTCTAGAGGGTACTTTCAGTACTGGGAAGCCCTCAGAAAATAAAAGAGGGGATCATGGTTATAGAGACGACCAAGGTAAAGATGAGAAAAGGGCTTCTTCAGATCCACCCCTTCAGCTCGATCTTCTTCCCTTCACTCCTGTTCCTCGAACGCACTCGCCTTCTCAGCTTCGGATTCCTTGGCTATCAGATGCATGTAAACGCTACAACAGTCTGACAGTGGGTTTTGAGCGCGTTTCATCAGATCCGGGTCCGAGGTTGTTGGATGTGAACCGTTTGCCGGTGGCGGAGACCCCGCCAGTGGAGGACGCCGACGATGGTGCTGCACTGTCGTCACCTAACAGTGCCGTGTCATCGTTCCAAATGGATTTGTGCGTTAGGAACAATGGTAATGCGAGCAGAAACAAGAGAGAGAATGAAGGGGAAACCGAGAGAACGAGTTCGAGAGCGAGCGATGATGAAGACAATGGATCAACTCGGAAGAAACTCAGACTCTCCAAGGAGCAATCAGCTTTCCTCGAAGAGAGCTTCAAAGAACACTCTACGCTCAATCCTAAGCAGAAACTTGCTCTTGCAAAACAGTTAAATCTTCGTCCTCGTCAAGTAGAAGTTTGGTTTCAGAACAGAAGGGCAAGGACAAAGTTGAAGCAGACAGAGGTGGATTGTGAATATTTAAAGCGATGCTGCGAGACACTGACGGAAGAGAATAGGAGGTTACAGAAGGAACTGCAAGAACTAAGAGCTTTAAAGGCTTCTCAGCCATTTTACATGCAGCTCCCAGCTACCACTCTTACCATGTGTCCCTCTTGTGAACGTGTCGCTACCAACTCATCCTCCGGAGCCGCCAATCAAACCGCCAGCAACACTTCCCAAGTCCCACCTCCGTTGTCTCTTAGCCAATGCTGA 1008 0.4871 MELALSLGDSSKAFSFLDKPIKMPNKDPNPGFCIALEGTFSTGKPSENKRGDHGYRDDQGKDEKRASSDPPLQLDLLPFTPVPRTHSPSQLRIPWLSDACKRYNSLTVGFERVSSDPGPRLLDVNRLPVAETPPVEDADDGAALSSPNSAVSSFQMDLCVRNNGNASRNKRENEGETERTSSRASDDEDNGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKASQPFYMQLPATTLTMCPSCERVATNSSSGAANQTASNTSQVPPPLSLSQC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01078 335 Pfam Homeobox associated leucine zipper 250 284 IPR003106 GO:0006355|GO:0043565
Bach8g01078 335 CDD homeodomain 194 251 IPR001356 GO:0003677
Bach8g01078 335 ProSiteProfiles 'Homeobox' domain profile. 190 250 IPR001356 GO:0003677
Bach8g01078 335 MobiDBLite consensus disorder prediction 167 199 - -
Bach8g01078 335 SUPERFAMILY Homeodomain-like 185 251 IPR009057 -
Bach8g01078 335 MobiDBLite consensus disorder prediction 36 88 - -
Bach8g01078 335 Pfam Homeodomain 194 248 IPR001356 GO:0003677
Bach8g01078 335 MobiDBLite consensus disorder prediction 46 69 - -
Bach8g01078 335 CDD bZIP 243 282 - -
Bach8g01078 335 MobiDBLite consensus disorder prediction 312 335 - -
Bach8g01078 335 MobiDBLite consensus disorder prediction 162 199 - -
Bach8g01078 335 Coils Coil 256 286 - -
Bach8g01078 335 SMART HOX_1 192 254 IPR001356 GO:0003677
Bach8g01078 335 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 58 325 - -
Bach8g01078 335 ProSitePatterns 'Homeobox' domain signature. 225 248 IPR017970 GO:0000981|GO:0006355
Bach8g01078 335 FunFam Homeobox-leucine zipper protein 18 177 255 - -
Bach8g01078 335 Pfam HD-ZIP protein N terminus 70 154 IPR006712 GO:0005634
Bach8g01078 335 Gene3D - 198 248 - -
Bach8g01078 335 SMART halz 250 293 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01078 Bach-Chr8 7166847 7168031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01078 120 331 Homeobox Transcription Factor Family AT3G60390 61.333 3.43e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach8g01078 HD-ZIP_N 4.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01078 K09338 - qsa:O6P43_005825 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01078 8 7166847 7168031 Bach1g02241 1 34458489 34459846 BWGD
Bach8g01078 8 7166847 7168031 Bach8g01078 8 7166847 7168031 ECH